Phdlc1_m QTL Report (Mus musculus) - Rat Genome Database

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QTL: Phdlc1_m (plasma HDL cholesterol 1 (mouse)) Mus musculus

Symbol: Phdlc1_m
Name: plasma HDL cholesterol 1 (mouse)
RGD ID: 1357682
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38934,193,323 - 42,853,570MOUSEQTLGRCm38
cM Map9syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Mouse Genome Database (MGD)
2. RGD automated import pipeline
Additional References at PubMed
PMID:12810823  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
62124Nrgnneurogranin93754449337552745Mouse
1320442Ei24etoposide induced 2.4 mRNA93677915336797334Mouse
1322489Pate4prostate and testis expressed 493560709335611885Mouse
10683Grik4glutamate receptor, ionotropic, kainate 494251818242945000Mouse
1323419Foxred1FAD-dependent oxidoreductase domain containing 193520420835211171Mouse
1552785Panx3pannexin 393765990237669222Mouse
1313474Gramd1bGRAM domain containing 1B94029323340533614Mouse
10733Hspa8heat shock protein 894080127640805202Mouse
1312136Crtamcytotoxic and regulatory T cell molecule94097279841004628Mouse
1331955Ubash3bubiquitin associated and SH3 domain containing, B94101076041161692Mouse
1322249Robo3roundabout guidance receptor 393741604537433436Mouse
732293Chek1checkpoint kinase 193670848236726658Mouse
1550784Tbceltubulin folding cofactor E-like94241231642472238Mouse
1550542Vwa5avon Willebrand factor A domain containing 5A93871826838743337Mouse
731295Spa17sperm autoantigenic protein 1793760329437613916Mouse
1551275Dcpsdecapping enzyme, scavenger93512441435175987Mouse
1557895Zfp202zinc finger protein 20294019231640213604Mouse
1551657Robo4roundabout guidance receptor 493740190237414023Mouse
1551659Esamendothelial cell-specific adhesion molecule93752808937538319Mouse
16086266720432D03RikRIKEN cDNA 6720432D03 gene94185211241876263Mouse
1609475Olfr936olfactory receptor 93693904661439047549Mouse
1552496Olfr149olfactory receptor 14993970183239702767Mouse
1614159Olfr952olfactory receptor 95293942609339427148Mouse
1553875Olfr986olfactory receptor 98694018707940188094Mouse
1613233Olfr251olfactory receptor 25193837788338378833Mouse
16129664930546K05RikRIKEN cDNA 4930546K05 gene94218223842209231Mouse
1557909Olfr970olfactory receptor 97093981964139820576Mouse
1613234Olfr250olfactory receptor 25093836754838368543Mouse
1552523Olfr971olfactory receptor 97193983943639840359Mouse
16112031700063D05RikRIKEN cDNA 1700063D05 gene94120615541217627Mouse
1551825Sc5dsterol-C5-desaturase94225159242264300Mouse
1332251Scn3bsodium channel, voltage-gated, type III, beta94026921640291618Mouse
1607652Mir125b-1microRNA 125b-194158192641582002Mouse
1552957Olfr229olfactory receptor 22993990980539910728Mouse
1614118Olfr968olfactory receptor 96893977177239772798Mouse
1607559Mirlet7a-2microRNA let7a-294153671641536811Mouse
1607333Pate13prostate and testis expressed 1393590842335910796Mouse
1612262Mir100hgMir100 Mirlet7a-2 Mir125b-1 cluster host gene94137652641615185Mouse
16102851700110K17RikRIKEN cDNA 1700110K17 gene94033347240343337Mouse
1608164Mir100microRNA 10094153142541531504Mouse
16092814933422A05RikRIKEN cDNA 4933422A05 gene93528110535285423Mouse
16091134930581F22RikRIKEN cDNA 4930581F22 gene93511672835130922Mouse
1322998Srprsignal recognition particle receptor ('docking protein')93521120335217003Mouse
1551481Olfr891olfactory receptor 89193817987138180821Mouse
1614909Msantd2Myb/SANT-like DNA-binding domain containing 293748753237526113Mouse
732378Fez1fasciculation and elongation protein zeta 1 (zygin I)93682139836878926Mouse
1551150Olfr148olfactory receptor 14893961356939614501Mouse
1553260Olfr945olfactory receptor 94593925772039258679Mouse
68551Ddx25DEAD box helicase 2593554184835558470Mouse
1614772Gm1113predicted gene 111393550922235518269Mouse
1551611Olfr888olfactory receptor 88893810868838109632Mouse
1613829Gm6796predicted pseudogene 679693791115337911444Mouse
1552782Olfr959olfactory receptor 95993957232239573257Mouse
1552110Olfr934olfactory receptor 93493898211038983042Mouse
1615609Olfr933olfactory receptor 93393897567838976604Mouse
1614620Tpt1-ps5tumor protein, translationally-controlled, pseudogene 593769640637697241Mouse
1553244Olfr938olfactory receptor 93893907779639078743Mouse
1615161Sorl1sortilin-related receptor, LDLR class A repeats-containing94196470942124297Mouse
1332286Tmem218transmembrane protein 21893720822337223228Mouse
16130491700027I24RikRIKEN cDNA 1700027I24 gene93666885636693189Mouse
1614119Olfr972olfactory receptor 97293987327739874221Mouse
1553765Olfr150olfactory receptor 15093973681739737755Mouse
1552034Olfr984olfactory receptor 98494010054440101488Mouse
1550918Olfr976olfactory receptor 97693995425739961044Mouse
1619790Olfr892-ps1olfactory receptor 892, pseudogene 193818979938190655Mouse
1617063Gm6762predicted pseudogene 676293557363735574665Mouse
1619785Olfr947-ps1olfactory receptor 947, pseudogene 193928792439299481Mouse
1618895Olfr951olfactory receptor 95193939379339394737Mouse
1556863Olfr955olfactory receptor 95593946978039470724Mouse
1619796Olfr977-ps1olfactory receptor 977, pseudogene 193997387939974821Mouse
1320370Tectatectorin alpha94232962242401690Mouse
1557372Olfr948olfactory receptor 94893931864739319612Mouse
1313713Slc37a2solute carrier family 37 (glycerol-3-phosphate transporter), member 293722914937255738Mouse
1557396Stt3aSTT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)93672934436767622Mouse
1616484Olfr918olfactory receptor 91893867250438673481Mouse
1553834Olfr145olfactory receptor 14593789056737898338Mouse
1553110Olfr943olfactory receptor 94393916631039185124Mouse
1617262Olfr981olfactory receptor 98194002239540023327Mouse
1550366Olfr881olfactory receptor 88193799249237993439Mouse
1550816Olfr877olfactory receptor 87793785482037855755Mouse
1616499Olfr954olfactory receptor 95493946143339462377Mouse
1552010Olfr937olfactory receptor 93793905972939060664Mouse
733455Acrv1acrosomal vesicle protein 193669322036698845Mouse
1552582Olfr961olfactory receptor 96193964672839647672Mouse
1617801Pate12prostate and testis expressed 1293643182936434938Mouse
1550267Olfr958olfactory receptor 95893954993139550869Mouse
1550578St3gal4ST3 beta-galactoside alpha-2,3-sialyltransferase 493504657635116864Mouse
1618920Olfr925-ps1olfactory receptor 925, pseudogene 193886886638869695Mouse
1552324Olfr913olfactory receptor 91393859280338595161Mouse
1618497Gm8707predicted gene 870794165428541655474Mouse
1615613Olfr887olfactory receptor 88793808483838085767Mouse
1615600Olfr889olfactory receptor 88993811579838116727Mouse
1615601Olfr890olfactory receptor 89093814313738144081Mouse
1615614Olfr883olfactory receptor 88393802580838026737Mouse
1614867Olfr944olfactory receptor 94493921735939218294Mouse
1552943Olfr919olfactory receptor 91993869742938698376Mouse
1617971Pate2prostate and testis expressed 293561180035672889Mouse
1550996Olfr893olfactory receptor 89393820905238209993Mouse
1615602Olfr897-ps1olfactory receptor 897, pseudogene 193830878838309731Mouse
1557070Olfr930olfactory receptor 93093893017338931099Mouse
1550407Pus3pseudouridine synthase 393555856035567401Mouse
1619763Olfr1537olfactory receptor 153793923748739238431Mouse
1332541Jhyjunctional cadherin complex regulator94089485140966266Mouse
1312970Tbrg1transforming growth factor beta regulated gene 193764918237657312Mouse
1618931Olfr966-ps1olfactory receptor 966, pseudogene 193972371939724544Mouse
1618932Olfr1545-ps1olfactory receptor 1545, pseudogene 193894685538947546Mouse
733697Cdoncell adhesion molecule-related/down-regulated by oncogenes93542152835507652Mouse
1312058Pate6prostate and testis expressed 693578805035790112Mouse
1618907Olfr896-ps1olfactory receptor 896, pseudogene 193829194738292870Mouse
1552594Olfr884olfactory receptor 88493804442338048153Mouse
1619733Olfr886-ps1olfactory receptor 886, pseudogene 193807009238070748Mouse
1619734Olfr956-ps1olfactory receptor 956, pseudogene 193947377439474602Mouse
1619732Olfr882-ps1olfactory receptor 882, pseudogene 193800305738003888Mouse
1550765Olfr901olfactory receptor 90193843028438431219Mouse
1551170Olfr965olfactory receptor 96593971922939720167Mouse
1618020Olfr949-ps1olfactory receptor 949, pseudogene 193936455239365480Mouse
1551703Olfr917olfactory receptor 91793866491338665842Mouse
1552519Olfr960olfactory receptor 96093962312539624165Mouse
1557168Bsxbrain specific homeobox94087412740878962Mouse
1323360AW551984expressed sequence AW55198493958739639604774Mouse
1332119Siaesialic acid acetylesterase93761382137648258Mouse
1618958Pate14prostate and testis expressed 1493663575436638602Mouse
1550034Olfr963olfactory receptor 96393966905939669994Mouse
1553563Olfr967olfactory receptor 96793975038839751320Mouse
1618919Olfr941-ps1olfactory receptor 941, pseudogene 193910405239104992Mouse
1622230Tmem225transmembrane protein 22594014812240150880Mouse
1623736Olfr146olfactory receptor 14693901861939019539Mouse
1553378Olfr935olfactory receptor 93593899450738995433Mouse
1550270Olfr975olfactory receptor 97593994983739950769Mouse
1550291Rpusd4RNA pseudouridylate synthase domain containing 493526788135275957Mouse
1551676Olfr980olfactory receptor 98094000599440007029Mouse
1551173Olfr978olfactory receptor 97893999381239994747Mouse
1551578Olfr979olfactory receptor 97994000020640001250Mouse
1552479Olfr974olfactory receptor 97493994205939943194Mouse
1322815Kirrel3kirre like nephrin family adhesion molecule 393448585335040807Mouse
1622622Gm5916predicted gene 591693611936436128845Mouse
1553040Olfr916olfactory receptor 91693865745838658390Mouse
1552680Olfr957olfactory receptor 95793951078339511718Mouse
1623299Olfr26olfactory receptor 2693885506038855990Mouse
1553210Olfr921olfactory receptor 92193877308838776354Mouse
1551785Olfr911-ps1olfactory receptor 911, pseudogene 193852373038524669Mouse
1551811Olfr908olfactory receptor 90893851603438516965Mouse
1551217Olfr898olfactory receptor 89893834908538350035Mouse
1623112Hyls1HYLS1, centriolar and ciliogenesis associated93556082135570069Mouse
1550712Olfr910olfactory receptor 91093853788238539829Mouse
1622903Olfr912olfactory receptor 91293858024438582211Mouse
1315637Hepacamhepatocyte cell adhesion molecule93736735637386572Mouse
1620537Olfr885olfactory receptor 88593806132238062251Mouse
1622023Ccdc15coiled-coil domain containing 1593726746237350218Mouse
1619644Olfr151olfactory receptor 15193772997737731061Mouse
1552091Olfr906olfactory receptor 90693848803138488966Mouse
1552401Olfr160olfactory receptor 16093771134837712280Mouse
1551770Olfr923olfactory receptor 92393882761538828682Mouse
1622902Olfr926olfactory receptor 92693887717838878104Mouse
1622722Olfr953-ps1olfactory receptor 953, pseudogene 193945229539453250Mouse
1622904Olfr143olfactory receptor 14393825341938254360Mouse
1623735Olfr875olfactory receptor 87593777263737773640Mouse
1622884Olfr874olfactory receptor 87493774530037747106Mouse
1550416Olfr25olfactory receptor 2593832949238330559Mouse
1552217Olfr147olfactory receptor 14793840171138403829Mouse
1553118Olfr894olfactory receptor 89493821881838219766Mouse
1623840Pknox2Pbx/knotted 1 homeobox 293689097937147342Mouse
1622899Olfr27olfactory receptor 2793912816739145072Mouse
1622727Olfr939-ps1olfactory receptor 939, pseudogene 193908449639084852Mouse
1622728Olfr932-ps1olfactory receptor 932, pseudogene 193894897438949243Mouse
1551789Olfr895olfactory receptor 89593826800138269753Mouse
1558539Vsig2V-set and immunoglobulin domain containing 293753925537544205Mouse
1550986Olfr876olfactory receptor 87693780388937804936Mouse
1553333Olfr905olfactory receptor 90593847274938473681Mouse
1622725Olfr942-ps1olfactory receptor 942, pseudogene 193915892439159925Mouse
1319574Olfr985olfactory receptor 98594012692440128039Mouse
1553603Olfr982olfactory receptor 98294007429740075262Mouse
1621449Pate5prostate and testis expressed 593583832935844150Mouse
1623642Olfr924olfactory receptor 92493884811638849042Mouse
1551291Olfr907olfactory receptor 90793849867138499603Mouse
1622723Olfr950-ps1olfactory receptor 950, pseudogene 193938333039384279Mouse
1622731Olfr928-ps1olfactory receptor 928, pseudogene 193889557438895816Mouse
1550923Olfr920olfactory receptor 92093875279638756863Mouse
1313983ClmpCXADR-like membrane protein94068212340785553Mouse
1551073Olfr983olfactory receptor 98394009201740093558Mouse
1622900Olfr969olfactory receptor 96993979537739796312Mouse
1622889Olfr964-ps1olfactory receptor 964, pseudogene 193968602939686942Mouse
1551500Olfr922olfactory receptor 92293881540838816539Mouse
1551647Olfr904olfactory receptor 90493846403438467656Mouse
1550107Olfr878olfactory receptor 87893791854837919612Mouse
1622733Olfr1543-ps1olfactory receptor 1543, pseudogene 193845645238457531Mouse
1622734Olfr880-ps1olfactory receptor 880, pseudogene 193796828937968524Mouse
1622648Pate9prostate and testis expressed 993653240336541963Mouse
1622649Gm5614predicted gene 561493528146735281870Mouse
1551624Olfr914olfactory receptor 91493860646738607417Mouse
1552521Olfr915olfactory receptor 91593864659038647522Mouse
1322403Tiraptoll-interleukin 1 receptor (TIR) domain-containing adaptor protein93518439135200291Mouse
1550987Olfr902olfactory receptor 90293844879238449847Mouse
2294170Gm8343predicted gene 834393768591937687126Mouse
2295147Gm10177predicted gene 1017793725291537253341Mouse
2295257Gm10105predicted pseudogene 1010593558867835589447Mouse
2295951Gm8543predicted gene 854393907402839075845Mouse
2296012Gm4893predicted gene 489394016434340165027Mouse
2299506Pate11prostate and testis expressed 1193647558336481835Mouse
2299626Gm3896predicted gene 389693701553137020671Mouse
2299643Gm3867predicted gene 386793625715336258321Mouse
2294864Gm5055predicted gene 505594048771840488300Mouse
1553607Olfr44olfactory receptor 4493948420439493988Mouse
10004382Gm39318predicted gene, 3931893519008735193905Mouse
1332352Fam118bfamily with sequence similarity 118, member B93521696535267875Mouse
2299841Gm3434predicted gene 343493613428736135630Mouse
1624526Gm10690predicted gene 1069094226445042266412Mouse
2302714Olfr962-ps1olfactory receptor 962, pseudogene 193965800839658785Mouse
2302715Olfr940-ps1olfactory receptor 940, pseudogene 193909277539093229Mouse
2302716Olfr931-ps1olfactory receptor 931, pseudogene 193894515238945718Mouse
2302717Olfr929-ps1olfactory receptor 929, pseudogene 193890717338908079Mouse
2302718Olfr927-ps1olfactory receptor 927, pseudogene 193889224038893021Mouse
2302712Olfr879-ps1olfactory receptor 879, pseudogene 193794121737942080Mouse
2302713Olfr946-ps1olfactory receptor 946, pseudogene 193928429639285240Mouse
2302719Gm5010predicted gene 501093867860938679205Mouse
2309265Gm6885predicted gene 688594116404941164881Mouse
2314129Snord14csmall nucleolar RNA, C/D box 14C94080358340803669Mouse
2314043Snord14esmall nucleolar RNA, C/D box 14E94080474840804838Mouse
2314044Snord14dsmall nucleolar RNA, C/D box 14D94080399540804081Mouse
2314441Gm3428predicted gene 342893584854535849880Mouse
37889931700001J11RikRIKEN cDNA 1700001J11 gene94005055840053025Mouse
5132577Pate3prostate and testis expressed 393564511335648203Mouse
5143227Gm18329predicted gene, 1832993727525837275830Mouse
5142666Gm18892predicted gene, 1889294003986740040775Mouse
5138938Gm17540predicted gene, 1754094053115540533620Mouse
5142971Gm18586predicted gene, 1858694092989940930428Mouse
5140194Gm19709predicted gene, 1970993878625738786777Mouse
5143777Gm17798predicted gene, 1779893818477638186029Mouse
5144791Pate1prostate and testis expressed 193568507935687371Mouse
5144929Pate10prostate and testis expressed 1093574096035742570Mouse
5144937Pate7prostate and testis expressed 793577652435778109Mouse
5144949Pate8prostate and testis expressed 893658127836582635Mouse
7178114Gm20953predicted gene, 2095393893748938940112Mouse
7178470Gm21041predicted gene, 2104193932730039327878Mouse
9592696Gm26787predicted gene, 2678793676788736782676Mouse
9621994Gm36435predicted gene, 3643594227481642279871Mouse
9637962Gm35123predicted gene, 3512394013631340143867Mouse
9635514Gm16214predicted gene 1621494202261542038956Mouse
9598365Gm35005predicted gene, 3500593755525637567479Mouse
9623103Gm34652predicted gene, 3465293697413036979931Mouse
9623221Gm27219predicted gene 2721993681310636832555Mouse
9623685Gm35940predicted gene, 3594094180563441834517Mouse
9600784Gm16322predicted gene 1632294246650342511643Mouse
9605292Gm34885predicted gene, 3488593731213637324368Mouse
9605762Gm34538predicted gene, 3453893703731337083874Mouse
9605875Gm33974predicted gene, 3397493531795135320362Mouse
9608856Gm35177predicted gene, 3517794054732540559855Mouse
9609332Gm36390predicted gene, 3639094219189542195259Mouse
9617342Gm16096predicted gene 1609694078261140786468Mouse
9617783Gm33838predicted gene, 3383893528551435307723Mouse
9614996Gm36170predicted gene, 3617094189026241892399Mouse
9615929Gm36590predicted gene, 3659094267351242685183Mouse
9595694Gm36119predicted gene, 3611994187630441878100Mouse
9672585Gm33613predicted gene, 3361393477533934806226Mouse
9676170Gm33777predicted gene, 3377793469209534711952Mouse
9676771Gm36227predicted gene, 3622794191194941919198Mouse
9665405Gm35371predicted gene, 3537194066822340670237Mouse
9669586Gm36032predicted gene, 3603294185213841876283Mouse
9644488Gm33561predicted gene, 3356193482324734855194Mouse
9650934Gm35657predicted gene, 3565794115864341184888Mouse
9654167Gm35835predicted gene, 3583594165550141737449Mouse
9655051Gm35259predicted gene, 3525994060757440616515Mouse
10021114Gm39320predicted gene, 3932094163664741649549Mouse
10014362Gm38622predicted gene, 3862294075797340762410Mouse
10008215Gm40512predicted gene, 4051294155239341559143Mouse
10006195Gm40510predicted gene, 4051094055511940559347Mouse
10033490Gm40511predicted gene, 4051194157096041579267Mouse
10025404Gm40513predicted gene, 4051394188615641900738Mouse
10029112Gm39321predicted gene, 3932194214208142145950Mouse
10038167Gm40515predicted gene, 4051594222866842241628Mouse
10025786Gm40514predicted gene, 4051494190602341910936Mouse
10026651Gm39319predicted gene, 3931994066349540666505Mouse
11084032Kirrel3oskirre like nephrin family adhesion molecule 3, opposite strand93491823035007695Mouse
12796585Gm45955predicted gene, 4595593486010134870472Mouse
12793305Gm46107predicted gene, 4610793755544437567479Mouse
12797819Gm46143predicted gene, 4614394176033241765145Mouse
15019937Gm51668predicted gene, 5166894041698040441044Mouse
15020336Gm51705predicted gene, 5170593505477635059965Mouse
15020494Gm51670predicted gene, 5167094157096041579646Mouse
15021474Gm51735predicted gene, 5173594156058741560766Mouse
14997934Gm23271predicted gene, 2327193851117338511296Mouse
14998124Gm24764predicted gene, 2476493782258637822784Mouse
15554335Gm25630predicted gene, 2563093547488535475046Mouse
14998570Gm48277predicted gene, 4827794055509140557786Mouse
15003073Gm24278predicted gene, 2427893953782639537952Mouse
15001065Gm24262predicted gene, 2426293514463635144779Mouse
15001246Gm47629predicted gene, 4762994238589742391369Mouse
14999150Gm25401predicted gene, 2540194133943641339541Mouse
15001625Gm26272predicted gene, 2627294231755042317681Mouse
155644036720432D03RikRIKEN cDNA 6720432D03 gene94180315941805683Mouse
39129056LOC109280113VISTA enhancer mm133794107163941074687Mouse
39129495LOC110120504VISTA enhancer mm148694122790241230545Mouse
39131271LOC109279967VISTA enhancer mm57793705333937055278Mouse
39129223LOC110120395VISTA enhancer mm73494188901041892513Mouse
39129312LOC115487216uncharacterized LOC11548721693511720035119544Mouse
39129328LOC114827881VISTA enhancer mm162494072977740732407Mouse
39130569LOC110120505VISTA enhancer mm149394194914041954525Mouse
39131027LOC114827874VISTA enhancer mm160894173497841737961Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
4895787AW74329324894045638840456635Mouseregion
4895777BB39448211093958762039587729Mouseregion
4895779BB46256310794021305540213161Mouseregion
4895781AW82199423194045698840457218Mouseregion
4898527RH12722421693670955036709765Mouseregion
7197072U3199214093669864536698785Mouseregion
4895771AU01496520093613601136136210Mouseregion
4895771AU01496520093585031735850518Mouseregion
4895775BB24109011193764816937648279Mouseregion
4895783M-0935710294267908742679188Mouseregion
4895785RH12709425094087116140871410Mouseregion
4900776RH13027515293512129635121447Mouseregion
4901394fi13b11.x132794054956240549888Mouseregion
4902903AI84844813794159241941592555Mouseregion
4904805AW55781913894078282940782966Mouseregion
4904807AW26156110394196524841965350Mouseregion
4901051RH13224319093738479837384987Mouseregion
4904797AW0470469493554195735542050Mouseregion
4904799AV00493114993722278837222936Mouseregion
4904801AW55198411593958844439588558Mouseregion
4904803AI59324913094029340340293532Mouseregion
4925427D2Mit298.214993879166338791811Mouseregion
4925429D2Mit29812293680089936801264Mouseregion
4908489BB08170814193673125536731395Mouseregion
4908491AW55249115093874312938743278Mouseregion
4908495BB12500811094101369941013808Mouseregion
491326710.MMHAP16FRD7.seq16793447572134475887Mouseregion
4917974MHAa84d1.seq18693697907636979261Mouseregion
4917388MHAa21d4.seq17993493618534936363Mouseregion
4908483AW98611213893512654435126681Mouseregion
4908485BB23655811593748801837488132Mouseregion
4908493BB2393358994089492140895009Mouseregion
4918641U3199215193669866936698820Mouseregion
4908487AI48062412593749762137497746Mouseregion
491285905.MMHAP38FLB2.seq18393450884634509028Mouseregion
491485327.MMHAP9FRA12.seq15793480211734802273Mouseregion
4935907RH11832516193807662838076788Mouseregion
4935915RH11832612394010724240107364Mouseregion
4936210RH12429219893677968236779879Mouseregion
4947743UniSTS:23608921393556691035567122Mouseregion
4947745UniSTS:23609118693673246936732654Mouseregion
4947751UniSTS:23609421993995436839954586Mouseregion
4947769UniSTS:23610220694159260041592805Mouseregion
4947771UniSTS:23610413194225301042253140Mouseregion
4936928RH12465324793518459335184839Mouseregion
4937206RH12479319293673129636731486Mouseregion
4938038RH12521018893754496037545147Mouseregion
4939167RH12586525093764920137649450Mouseregion
4930290D9Mit12714593545218235452326Mouseregion
4930294D9Mit12814293682748436827625Mouseregion
4930314D9Mit13913894155426041554397Mouseregion
4930507D9Mit22411193682494736825057Mouseregion
4930651D9Mit28610894112147941121586Mouseregion
4930320D9Mit14013594285343642853570Mouseregion
4930344D9Mit15311094030051740300626Mouseregion
4930459D9Mit2069894050829840508395Mouseregion
4930585D9Mit25321794073407840734294Mouseregion
4930711D9Mit32624993761163037611878Mouseregion
4930713D9Mit3258793419332334193409Mouseregion
4930715D9Mit32712593958420939584333Mouseregion
4930721D9Mit32818294188784941888030Mouseregion
4933739C7657811893527571435275831Mouseregion
4933741AF0908668993550421635504304Mouseregion
4933747AF00110412294097323240973353Mouseregion
4933745AU0404848293754409837544179Mouseregion
4933749D9Mit2549794267618942676285Mouseregion
4936412RH12439315793721659537216751Mouseregion
4936412RH12439315793721659537216730Mouseregion
4937705RH12504226994199533941995608Mouseregion
4939055RH12579914193512444735124587Mouseregion
4939887A630095E13Rik5293663851636638567Mouseregion
4930312D9Mit139.112594155415841554282Mouseregion
4930350D9Mit153.211094030044940300558Mouseregion
4930567D9Mit24714993713290737133055Mouseregion
4930837D9Mit6612493492645234926575Mouseregion
7198483Hyls154793556121035561756Mouseregion
4930461D9Mit206.112794050816640508292Mouseregion
4930511D9Mit225.211093536952435369634Mouseregion
4930513D9Mit22632193654604836546368Mouseregion
4930515D9Mit2278394149086641490948Mouseregion
4930583D9Mit25211593696913636969250Mouseregion
4930645D9Mit28512594065449440654618Mouseregion
4930802D9Mit4518994211748842117677Mouseregion
4930839D9Mit6712093703211037032229Mouseregion
4930890D9Mit9113193724206637242196Mouseregion
493374340.MMHAP23FLF4.seq16293963944939639610Mouseregion
4935913RH11832715793834492738345083Mouseregion
4947741UniSTS:23608820193550464735504847Mouseregion
4947747UniSTS:23609221693874212138742336Mouseregion
4947749UniSTS:23609321893958831939588536Mouseregion
4947753UniSTS:23609520793723080537231011Mouseregion
4947755UniSTS:23609623693749740437497639Mouseregion
4947757UniSTS:23609735793689232636892682Mouseregion
4947759UniSTS:23609829894029545140295748Mouseregion
4947763UniSTS:23610026894101418341014450Mouseregion
4947765UniSTS:23610120694101476141014966Mouseregion
4947773UniSTS:23610520794078506640785272Mouseregion
4957670AI59321711593741382437413938Mouseregion
4948669UniSTS:23663139393521398935214883Mouseregion
4959494AI83850511593754479337544907Mouseregion
4952442PMC113864P18994080358140804081Mouseregion
4952442PMC113864P18994080358140803669Mouseregion
4962432RH13784717094196478741964956Mouseregion
4962630RH13944017693760324237603417Mouseregion
4963552UniSTS:22447510293754506437545165Mouseregion
4963376UniSTS:224380094257026642570343Mouseregion
4964277UniSTS:22487117993890484138905019Mouseregion
4954246D8Mit11212093969509439695213Mouseregion
4954260D9Mit20519193729832437298517Mouseregion
4964606UniSTS:22505218093769553337695712Mouseregion
4955379RH12599920293527575535275956Mouseregion
4955671RH12614721193808461338084823Mouseregion
4962410RH13766914093760233337602472Mouseregion
4962942RH14191316593512448235124646Mouseregion
4963434UniSTS:22441018093978148139781660Mouseregion
4952702PMC126621P128093505419935054478Mouseregion
4964357UniSTS:22491515393994534639945498Mouseregion
4964781UniSTS:22514818994187951041879698Mouseregion
4957672AI5962649794196510941965205Mouseregion
5012821AU04858113993514330135143439Mouseregion
5009568D9Bwg1411e26894199532841995596Mouseregion
5009685D9Mit31327094232350142323770Mouseregion
4970545Olfr87845193791906837919518Mouseregion
5004698Siat4c45093505312535054753Mouseregion
5009983Ei2415693677924936779405Mouseregion
5013234fb98c02.x126993488020834880476Mouseregion
4972235mAcrv139693669430436694699Mouseregion
5005512D11S18609594158391541584009Mouseregion
4983692PMC316686P127993672580236726080Mouseregion
4983696PMC316691P191593672583636726750Mouseregion
7195976Tecta20094233101842332496Mouseregion
7198493Crtam20794097319440973400Mouseregion
7198495Crtam32594100439041004714Mouseregion
5002280D9Mit217493739490137395074Mouseregion
5006325Acrv113293669869236698824Mouseregion
5001273RH4797616193556554535565705Mouseregion
5012905AU049662094111065441110854Mouseregion
5001459D11S3963E10993687875236878860Mouseregion
5001513GDB:19786315093521395735214237Mouseregion
5134416Chek119393671011536710307Mouseregion
5497104UniSTS:491515102093771129137712310Mouseregion
5497156UniSTS:491602100294002235240023353Mouseregion
5497174UniSTS:491611106593918410339185167Mouseregion
5497220UniSTS:491632104793799243937993485Mouseregion
5497222UniSTS:491635102493905966739060690Mouseregion
5497244UniSTS:491645105393814307438144126Mouseregion
5497292UniSTS:491673101694018707940188094Mouseregion
5497366UniSTS:491709113293881540838816539Mouseregion
5497368UniSTS:491710106093865741538658474Mouseregion
5498196UniSTS:493871105193789732537898375Mouseregion
5495700UniSTS:48509593393898211038983042Mouseregion
5495586UniSTS:48495694293832958938330530Mouseregion
5495690UniSTS:48509193093802580838026737Mouseregion
5495726UniSTS:48510893693923748739238422Mouseregion
5495726UniSTS:48510893693921735939218294Mouseregion
5495762UniSTS:48512892493983943639840359Mouseregion
5495838UniSTS:48516693393849867138499603Mouseregion
5494329UniSTS:23663031793521125835212432Mouseregion
5496408UniSTS:48932194593946143339462377Mouseregion
5496450UniSTS:48934694593810868838109632Mouseregion
5496452UniSTS:48934493693785482037855755Mouseregion
5496460UniSTS:48935094893869742938698376Mouseregion
5495714UniSTS:48510393093811579838116727Mouseregion
5496642UniSTS:48944395493882769338828646Mouseregion
5496650UniSTS:48944693693981964139820576Mouseregion
5496650UniSTS:48944693693979537739796312Mouseregion
5496660UniSTS:48945396694007429740075262Mouseregion
5496676UniSTS:48945893393777266137773593Mouseregion
5496676UniSTS:48945893393774613637747068Mouseregion
5496792UniSTS:48951793393994226239943194Mouseregion
5495816UniSTS:48515493693951078339511718Mouseregion
5495830UniSTS:48516293393864659038647522Mouseregion
5495850UniSTS:48517193393994983739950769Mouseregion
5495860UniSTS:48517893393851603438516965Mouseregion
5495944UniSTS:48522493693999381239994747Mouseregion
5495980UniSTS:48525993093773005337730981Mouseregion
5495980UniSTS:48525993093771134837712277Mouseregion
5497178UniSTS:491613100093820903038210029Mouseregion
5497294UniSTS:491672103993990971439910752Mouseregion
5497380UniSTS:491717109793853880138539897Mouseregion
5497382UniSTS:491716105293825335538254406Mouseregion
5497386UniSTS:491718105193887712638878176Mouseregion
5497408UniSTS:491730108193834899738350077Mouseregion
5497410UniSTS:491731104293826845138269492Mouseregion
5497412UniSTS:491733104893780388937804936Mouseregion
5497608UniSTS:492110103293885499438856025Mouseregion
5496608UniSTS:48942592193901861939019539Mouseregion
5496822UniSTS:48957394593946978039470724Mouseregion
5496822UniSTS:48957394593942612539427069Mouseregion
5495698UniSTS:48509494893907779639078743Mouseregion
5495764UniSTS:48512794593987327739874221Mouseregion
5495764UniSTS:48512794593977185439772798Mouseregion
5495818UniSTS:48515593393777266137773593Mouseregion
5495818UniSTS:48515593393774613637747068Mouseregion
5495840UniSTS:48516793393858127938582211Mouseregion
5497712UniSTS:492651110193893008938931189Mouseregion
5497724UniSTS:492655105093954984239550891Mouseregion
5497758UniSTS:492672107693817984638180921Mouseregion
5497766UniSTS:492675107093964670339647772Mouseregion
5497194UniSTS:491621106693867243838673503Mouseregion
5497250UniSTS:491651105593957226039573314Mouseregion
5497252UniSTS:491650108093925762039258699Mouseregion
5496384UniSTS:48930895193962312539624075Mouseregion
5496482UniSTS:48936099693836754838368543Mouseregion
5496496UniSTS:48936793393961356939614501Mouseregion
5497832UniSTS:492709111694012692440128039Mouseregion
5497834UniSTS:492711103693821880238219837Mouseregion
5497886UniSTS:492737104594000020640001250Mouseregion
5497938UniSTS:492900105193914401139145061Mouseregion
5497376UniSTS:491714106593791854837919612Mouseregion
5497378UniSTS:491715105693844879238449847Mouseregion
5497586UniSTS:491981105993884805638849114Mouseregion
5496498UniSTS:48936694593946978039470724Mouseregion
5496498UniSTS:48936694593942612539427069Mouseregion
5496542UniSTS:48939194594010054440101488Mouseregion
5496546UniSTS:48939294593987327739874221Mouseregion
5496546UniSTS:48939294593977185439772798Mouseregion
5496628UniSTS:48943594293877525738776198Mouseregion
5496630UniSTS:48943693393875569038756622Mouseregion
5497958UniSTS:492933100393897565138976653Mouseregion
5497962UniSTS:492932107493808476938085842Mouseregion
5497982UniSTS:492943109193981955039820640Mouseregion
5497990UniSTS:492948104693899445438995499Mouseregion
5497994UniSTS:492950111093860636738607476Mouseregion
5497996UniSTS:492953093852367038524697Mouseregion
5497998UniSTS:492951108694009197940093064Mouseregion
5498032UniSTS:492980105993923745539238513Mouseregion
5498394UniSTS:494308105293802574638026797Mouseregion
5498428UniSTS:494327103594010049140101525Mouseregion
5499342RH13389919094196863141969793Mouseregion
5498410UniSTS:494317102593961354439614568Mouseregion
5498598UniSTS:494965116493995590639957069Mouseregion
5498934UniSTS:495633100493777263737773640Mouseregion
5498948UniSTS:495640110393849860138499703Mouseregion
5498364UniSTS:494292106793962310539624171Mouseregion
5498400UniSTS:494311111993907769839078816Mouseregion
5498480UniSTS:494351112593877517438776298Mouseregion
5498550UniSTS:494408108693772997737731061Mouseregion
5498682UniSTS:49535698893847271838473705Mouseregion
5498902UniSTS:495617108293983933739840418Mouseregion
5498482UniSTS:494353102393858123638582258Mouseregion
5498582UniSTS:494940103794000599340007029Mouseregion
5498954UniSTS:495643106993979528739796355Mouseregion
5498754UniSTS:495450104593774607137747115Mouseregion
5499004UniSTS:495669108093994221539943294Mouseregion
5498360UniSTS:494289105793946974739470803Mouseregion
5498868UniSTS:495598105593814307238144126Mouseregion
5498868UniSTS:495598105593810862338109677Mouseregion
5498882UniSTS:495607105693942609339427148Mouseregion
5498890UniSTS:495608103893921733639218373Mouseregion
5498890UniSTS:495608103893914407939145116Mouseregion
5498900UniSTS:495616103193987324339874273Mouseregion
5498434UniSTS:494328105793977178639772842Mouseregion
5498466UniSTS:494344106193901855939019619Mouseregion
5498486UniSTS:494354106893882761538828682Mouseregion
5498748UniSTS:49542795194238371842384668Mouseregion
5498860UniSTS:495596111393785472537855837Mouseregion
5498878UniSTS:495604104593811575638116800Mouseregion
5498962UniSTS:495647106893832949238330559Mouseregion

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756137395074Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9999947243999472Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91245867446458818Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91347987947479879Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91550045549500594Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91550045549500594Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91550045549500594Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91550045549500594Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91583833149838331Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91583833149838331Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91583833149838331Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91610000050100000Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91610000050100000Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91679834550798345Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91706754451067647Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined92003211054032229Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92024206654242196Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92039490154395074Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92039490154395074Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92039490154395074Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92039490154395074Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92094144454941444Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92500000069000000Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92567618959676285Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92567618959676285Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92567618959676285Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92567618959676285Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92688512460885255Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92688512460885255Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92688512460885255Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92733989761340026Mouse
14700787Ncdq1_mnevus cell density QTL 1 (mouse)92820000036200000Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92859203741888030Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92938163163381774Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92938163163381774Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93014186664141979Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93050339840654618Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93082861764828723Mouse
4142455Elnv_mepilepsy naive (mouse)Not determined93136026237395074Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93252326366523557Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93254112166541246Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93259987266600121Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93297840266978536Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93319972567199840Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93406754473531973Mouse
1357682Phdlc1_mplasma HDL cholesterol 1 (mouse)Not determined93419332342853570Mouse
1300868Tlf_mT lymphocyte fraction (mouse)Not determined93492645237395074Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93512317869123299Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93512317869123299Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93512317869123299Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93682494749509211Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93703211050199840Mouse
1301007Pid2_mprion incubation determinant 2 (mouse)Not determined93724206644340026Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93739490198819654Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93791224471912244Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93819229172192291Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93819229172192291Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93819229172192291Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93949260173492601Mouse
1558993Tdmq1_mtype 2 diabetes modifying QTL 1 (mouse)Not determined94050829851897370Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94050829874700643Mouse
11532693Sluc39_msusceptibility to lung cancer 39 (mouse)94073407848440176Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94089776474897921Mouse
12738415Lfibq8_mliver fibrosis QTL 8 (mouse)94149086645432445Mouse
13515055Adip20a_madiposity 20a (mouse)94277942044142555Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:3525300

RGD Curation Notes
Note Type Note Reference