Pbw3_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Pbw3_m (pentobarbital withdrawal QTL 3 (mouse)) Mus musculus

Symbol: Pbw3_m
Name: pentobarbital withdrawal QTL 3 (mouse)
RGD ID: 1301718
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391135,578,616 - 44,065,931MOUSEQTLGRCm39
GRCm381135,687,789 - 44,175,104MOUSEQTLGRCm38
MGSCv37118,961,780 - 42,961,942 (+)MOUSEQTLGRCm37
MGSCv3117,784,231 - 43,784,231RGD
cM Map1115.63MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:11529278   PMID:16436183  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
735860Slit3slit guidance ligand 3113501228335599334Mouse
401833650LOC132441697STARR-positive B cell enhancer ABC_E1137113566008035660381Mouse
1321489Pank3pantothenate kinase 3113566032235682112Mouse
1608227Mir103-1microRNA 103-1113567322335673308Mouse
1614906Fbll1fibrillarin-like 1113568820735689711Mouse
1319433Rars1arginyl-tRNA synthetase 1113569920735725355Mouse
401836676LOC132441698STARR-positive B cell enhancer ABC_E9361113572519835725498Mouse
401835299LOC132441699STARR-positive B cell enhancer ABC_E6965113572918035729481Mouse
1318037Wwc1WW, C2 and coiled-coil domain containing 1113572922635871354Mouse
401711771LOC131378360STARR-seq mESC enhancer starr_29194113583907035839508Mouse
10020654Gm42072predicted gene, 42072113588869335920940Mouse
736748Tenm2teneurin transmembrane protein 2113589748337881486Mouse
401712721LOC131378361STARR-seq mESC enhancer starr_29197113591844935919790Mouse
10000327Gm12126predicted gene 12126113597149135975945Mouse
10004736Gm42071predicted gene, 42071113599378235996889Mouse
12793401Gm46251predicted gene, 46251113605492536064987Mouse
401709164LOC131378362STARR-seq mESC enhancer starr_29200113610785536110729Mouse
9644505Gm33585predicted gene, 33585113624850236322843Mouse
401703492LOC131378363STARR-seq mESC enhancer starr_29205113645381636454641Mouse
401704054LOC131378364STARR-seq mESC enhancer starr_29206113648042836481446Mouse
15018099Gm51889predicted gene, 51889113658836136642534Mouse
15001087Gm22127predicted gene, 22127113661370936613814Mouse
39130729Gm53696predicted gene, 53696113666119936689720Mouse
15020433Gm51890predicted gene, 51890113687992536888358Mouse
401713007LOC131378365STARR-seq mESC enhancer starr_29209113711327437114595Mouse
39128718Gm53695predicted gene, 53695113720985437278105Mouse
9617768Gm33791predicted gene, 33791113748799737513195Mouse
2293925Gm12128predicted gene 12128113754981637563993Mouse
401711309LOC131378366STARR-seq mESC enhancer starr_29211113764303737644159Mouse
401709408LOC131378367STARR-seq mESC enhancer starr_29212113791547137917129Mouse
401702537LOC131378368STARR-seq mESC enhancer starr_29213113801064138012930Mouse
2295248Gm12129predicted gene 12129113810992238111064Mouse
5145020Gm12130predicted gene 12130113838237538410872Mouse
15002505Gm23520predicted gene, 23520113868899838689104Mouse
401717161LOC131378369STARR-seq mESC enhancer starr_29214113879977138800556Mouse
401716959LOC131378370STARR-seq mESC enhancer starr_29215113895211338953652Mouse
5143271Gm18287predicted gene, 18287113906007539060859Mouse
16074204930553C11RikRIKEN cDNA 4930553C11 gene113919853039281052Mouse
401714023LOC131378371STARR-seq mESC enhancer starr_29217113938164239382998Mouse
9627334Gm33963predicted gene, 33963113947956939586262Mouse
401709612LOC131378372STARR-seq mESC enhancer starr_29218113955120539552388Mouse
14999413Gm24192predicted gene, 24192113972148339721643Mouse
401712350LOC131378373STARR-seq mESC enhancer starr_29220113987831239879790Mouse
401708325LOC131378374STARR-seq mESC enhancer starr_29221113989799039898905Mouse
9618271Gm12132predicted gene 12132113989902140228669Mouse
401706029LOC131378375STARR-seq mESC enhancer starr_29222113994086039942277Mouse
401700422LOC131378376STARR-seq mESC enhancer starr_29223114001860640019400Mouse
401712783LOC131378377STARR-seq mESC enhancer starr_29224114004926340050926Mouse
401702290LOC131378378STARR-seq mESC enhancer starr_29225114012763940128217Mouse
5147135Gm12133predicted gene 12133114031347740314078Mouse
9625859Gm34173predicted gene, 34173114031627840320565Mouse
16121633110004A20RikRIKEN cDNA 3110004A20 gene114036554340366505Mouse
401705693LOC131378379STARR-seq mESC enhancer starr_29227114036731940369742Mouse
9669744Gm34281predicted gene, 34281114045465440458141Mouse
401702417LOC131378380STARR-seq mESC enhancer starr_29228114045862840459949Mouse
2306597Gm12136predicted gene 12136114045994740461366Mouse
2295587Gm12138predicted gene 12138114056337340564721Mouse
1618238Mat2bmethionine adenosyltransferase 2 non-catalytic beta subunit methionine114057014140586030Mouse
401833841LOC132441700STARR-positive B cell enhancer ABC_E6966114058340740583708Mouse
10714Hmmrhyaluronan mediated motility receptor (RHAMM)114059221540624290Mouse
401705633LOC131378381STARR-seq mESC enhancer starr_29231114062412340626544Mouse
1551612Nudcd2NudC domain containing 2114062448540630873Mouse
401711610LOC131378382STARR-seq mESC enhancer starr_29232114062762240629190Mouse
735831Ccng1cyclin G1114063937940646044Mouse
401703502LOC131378383STARR-seq mESC enhancer starr_29234114064489540647415Mouse
401701952LOC131378384STARR-seq mESC enhancer starr_29235114092362640924832Mouse
14999083Gm24446predicted gene, 24446114092579540925950Mouse
2289890Hmgb1-ps1high mobility group box 1, pseudogene 1114103248541034809Mouse
401713059LOC131378385STARR-seq mESC enhancer starr_29236114110524241106434Mouse
401710901LOC131378386STARR-seq mESC enhancer starr_29237114111424641115096Mouse
5143080Gm18477predicted gene, 18477114112142141121926Mouse
401710294LOC131378387STARR-seq mESC enhancer starr_29238114116012841161656Mouse
401715638LOC131378388STARR-seq mESC enhancer starr_29239114132973841330820Mouse
2295586Hspd1-ps3heat shock protein 1 (chaperonin), pseudogene 3114138950441391738Mouse
2310987Btf3-ps7basic transcription factor 3, pseudogene 7114148194941482861Mouse
1607724A230004M16RikRIKEN cDNA A230004M16 gene114160117141859629Mouse
401710001LOC131378389STARR-seq mESC enhancer starr_29241114164564341646727Mouse
401717512LOC131378390STARR-seq mESC enhancer starr_29242114165258941653785Mouse
401705322LOC131378391STARR-seq mESC enhancer starr_29243114169919441700965Mouse
62259Gabrg2gamma-aminobutyric acid type A receptor, subunit gamma 2114180101741891684Mouse
401709850LOC131378392STARR-seq mESC enhancer starr_29244114197474441975662Mouse
401708138LOC131378393STARR-seq mESC enhancer starr_29245114199969342001458Mouse
62147Gabra1gamma-aminobutyric acid type A receptor subunit alpha 1114202176642073893Mouse
401708986LOC131378394STARR-seq mESC enhancer starr_29247114207975442080929Mouse
62153Gabra6gamma-aminobutyric acid type A receptor subunit alpha 6114219726442211977Mouse
401706916LOC131378395STARR-seq mESC enhancer starr_29248114227704442278382Mouse
39130172Gm53697predicted gene, 53697114229650742298704Mouse
9619146Gm34591predicted gene, 34591114230232642312032Mouse
10612Gabrb2gamma-aminobutyric acid type A receptor subunit beta 2114231034242523418Mouse
401702346LOC131378396STARR-seq mESC enhancer starr_29249114247220142474460Mouse
401702866LOC131378397STARR-seq mESC enhancer starr_29250114257447442575726Mouse
9635763Gm34644predicted gene, 34644114275484242764373Mouse
401715002LOC131378398STARR-seq mESC enhancer starr_29251114279605242797763Mouse
401713568LOC131378399STARR-seq mESC enhancer starr_29252114290269342903847Mouse
1614067Atp10bATPase, class V, type 10B114290299143153112Mouse
401704383LOC131378400STARR-seq mESC enhancer starr_29253114292235242923636Mouse
401838558LOC132441701STARR-positive B cell enhancer mm9_chr11:42987971-42988272114306529643065597Mouse
9646813Gm12146predicted gene 12146114308670843115272Mouse
15018746Gm51418predicted gene, 51418114310408943104174Mouse
401838645LOC132441702STARR-positive B cell enhancer ABC_E11475114318841043188710Mouse
401832953LOC132441703STARR-positive B cell enhancer mm9_chr11:43172342-43172643114324966743249968Mouse
1608327Mir146microRNA 146114326522443265288Mouse
401833143LOC132441704STARR-positive B cell enhancer ABC_E9138114327899143279291Mouse
1623540Gm5782predicted gene 5782114330544143309794Mouse
68512Pttg1pituitary tumor-transforming gene 1114331109743317417Mouse
401841352LOC132441705STARR-positive B cell enhancer ABC_E3940114331700943317310Mouse
401838021LOC132441706STARR-positive B cell enhancer ABC_E6968114332436643324667Mouse
1618204Slu7SLU7 splicing factor homolog (S. cerevisiae)114332455043338809Mouse
2312215Gm12151predicted gene 12151114335301043364888Mouse
1558095C1qtnf2C1q and tumor necrosis factor related protein 2114336498443382485Mouse
1615520Ccnjlcyclin J-like114341957643477826Mouse
401702209LOC131378401STARR-seq mESC enhancer starr_29256114343089343432308Mouse
401709492LOC131378402STARR-seq mESC enhancer starr_29259114347491943477603Mouse
401714468LOC131378403STARR-seq mESC enhancer starr_29260114348439143486125Mouse
10565Fabp6fatty acid binding protein 6114348686743492389Mouse
5147136Gm12149predicted gene 12149114350307043506774Mouse
401708898LOC131378404STARR-seq mESC enhancer starr_29264114354992243551248Mouse
2311998Gm12152predicted gene 12152114355643343562344Mouse
401709709LOC131378405STARR-seq mESC enhancer starr_29265114355823143558526Mouse
9620437Gm34963predicted gene, 34963114356412143573722Mouse
1314194Pwwp2aPWWP domain containing 2A114356688143613248Mouse
401833425LOC132441707STARR-positive B cell enhancer ABC_E75114357253443572835Mouse
401706629LOC131378406STARR-seq mESC enhancer starr_29267114359096743592647Mouse
1552341Ttc1tetratricopeptide repeat domain 1114362083343638835Mouse
401702688LOC131378407STARR-seq mESC enhancer starr_29268114363325143634597Mouse
401832326LOC132441708STARR-positive B cell enhancer ABC_E1414114363868943638990Mouse
10096Adra1badrenergic receptor, alpha 1b114366543243792076Mouse
9613465Gm12153predicted gene 12153114384991644025814Mouse
401715462LOC131378408STARR-seq mESC enhancer starr_29271114385031943852027Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
10043922Alcw9_malcohol withdrawal 9 (mouse)Not determined113557861644065931Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
1301814Bbaa7_mB.burgdorferi-associated arthritis 7 (mouse)Not determined112601178044264695Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
10053675Eae44b_mexperimental allergic encephalomyelitis susceptibility 44b (mouse)Not determined113995072854094448Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113776858060402716Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
1301718Pbw3_mpentobarbital withdrawal QTL 3 (mouse)Not determined113557861644065931Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
1558769Zolw1_mzolpidem withdrawal 1 (mouse)Not determined113557861644065931Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
1300713Vmbic10_mventral midbrain iron content 10 (mouse)Not determined114277262654081064Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:2151853

RGD Curation Notes
Note Type Note Reference