Tlf_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

QTL: Tlf_m (T lymphocyte fraction (mouse)) Mus musculus

Symbol: Tlf_m
Name: T lymphocyte fraction (mouse)
RGD ID: 1300868
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38934,926,452 - 37,395,074MOUSEQTLGRCm38
MGSCv37982,810,752 - 116,810,847 (+)MOUSEQTLGRCm37
MGSCv3915,117,212 - 51,117,212RGD
cM Map952.24MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Mouse Genome Database (MGD)
2. RGD automated import pipeline
Additional References at PubMed
PMID:9754812  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1320442Ei24etoposide induced 2.4 mRNA93677915336797334Mouse
1322489Pate4prostate and testis expressed 493560709335611885Mouse
1323419Foxred1FAD-dependent oxidoreductase domain containing 193520420835211171Mouse
732293Chek1checkpoint kinase 193670848236726658Mouse
1551275Dcpsdecapping enzyme, scavenger93512441435175987Mouse
1607333Pate13prostate and testis expressed 1393590842335910796Mouse
16092814933422A05RikRIKEN cDNA 4933422A05 gene93528110535285423Mouse
16091134930581F22RikRIKEN cDNA 4930581F22 gene93511672835130922Mouse
1322998Srprsignal recognition particle receptor ('docking protein')93521120335217003Mouse
732378Fez1fasciculation and elongation protein zeta 1 (zygin I)93682139836878926Mouse
68551Ddx25DEAD box helicase 2593554184835558470Mouse
1614772Gm1113predicted gene 111393550922235518269Mouse
1332286Tmem218transmembrane protein 21893720822337223228Mouse
16130491700027I24RikRIKEN cDNA 1700027I24 gene93666885636693189Mouse
1617063Gm6762predicted pseudogene 676293557363735574665Mouse
1313713Slc37a2solute carrier family 37 (glycerol-3-phosphate transporter), member 293722914937255738Mouse
1557396Stt3aSTT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)93672934436767622Mouse
733455Acrv1acrosomal vesicle protein 193669322036698845Mouse
1617801Pate12prostate and testis expressed 1293643182936434938Mouse
1550578St3gal4ST3 beta-galactoside alpha-2,3-sialyltransferase 493504657635116864Mouse
1617971Pate2prostate and testis expressed 293561180035672889Mouse
1550407Pus3pseudouridine synthase 393555856035567401Mouse
733697Cdoncell adhesion molecule-related/down-regulated by oncogenes93542152835507652Mouse
1312058Pate6prostate and testis expressed 693578805035790112Mouse
1618958Pate14prostate and testis expressed 1493663575436638602Mouse
1550291Rpusd4RNA pseudouridylate synthase domain containing 493526788135275957Mouse
1322815Kirrel3kirre like nephrin family adhesion molecule 393448585335040807Mouse
1622622Gm5916predicted gene 591693611936436128845Mouse
1623112Hyls1HYLS1, centriolar and ciliogenesis associated93556082135570069Mouse
1315637Hepacamhepatocyte cell adhesion molecule93736735637386572Mouse
1622023Ccdc15coiled-coil domain containing 1593726746237350218Mouse
1623840Pknox2Pbx/knotted 1 homeobox 293689097937147342Mouse
1621449Pate5prostate and testis expressed 593583832935844150Mouse
1622648Pate9prostate and testis expressed 993653240336541963Mouse
1622649Gm5614predicted gene 561493528146735281870Mouse
1322403Tiraptoll-interleukin 1 receptor (TIR) domain-containing adaptor protein93518439135200291Mouse
2295147Gm10177predicted gene 1017793725291537253341Mouse
2295257Gm10105predicted pseudogene 1010593558867835589447Mouse
2299506Pate11prostate and testis expressed 1193647558336481835Mouse
2299626Gm3896predicted gene 389693701553137020671Mouse
2299643Gm3867predicted gene 386793625715336258321Mouse
10004382Gm39318predicted gene, 3931893519008735193905Mouse
1332352Fam118bfamily with sequence similarity 118, member B93521696535267875Mouse
2299841Gm3434predicted gene 343493613428736135630Mouse
2314441Gm3428predicted gene 342893584854535849880Mouse
5132577Pate3prostate and testis expressed 393564511335648203Mouse
5143227Gm18329predicted gene, 1832993727525837275830Mouse
5144791Pate1prostate and testis expressed 193568507935687371Mouse
5144929Pate10prostate and testis expressed 1093574096035742570Mouse
5144937Pate7prostate and testis expressed 793577652435778109Mouse
5144949Pate8prostate and testis expressed 893658127836582635Mouse
9592696Gm26787predicted gene, 2678793676788736782676Mouse
9623103Gm34652predicted gene, 3465293697413036979931Mouse
9623221Gm27219predicted gene 2721993681310636832555Mouse
9605292Gm34885predicted gene, 3488593731213637324368Mouse
9605762Gm34538predicted gene, 3453893703731337083874Mouse
9605875Gm33974predicted gene, 3397493531795135320362Mouse
9617783Gm33838predicted gene, 3383893528551435307723Mouse
11084032Kirrel3oskirre like nephrin family adhesion molecule 3, opposite strand93491823035007695Mouse
15020336Gm51705predicted gene, 5170593505477635059965Mouse
15554335Gm25630predicted gene, 2563093547488535475046Mouse
15001065Gm24262predicted gene, 2426293514463635144779Mouse
39131271LOC109279967VISTA enhancer mm57793705333937055278Mouse
39129312LOC115487216uncharacterized LOC11548721693511720035119544Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
4898527RH12722421693670955036709765Mouseregion
7197072U3199214093669864536698785Mouseregion
4895771AU01496520093613601136136210Mouseregion
4895771AU01496520093585031735850518Mouseregion
4900776RH13027515293512129635121447Mouseregion
4901051RH13224319093738479837384987Mouseregion
4904797AW0470469493554195735542050Mouseregion
4904799AV00493114993722278837222936Mouseregion
4925429D2Mit29812293680089936801264Mouseregion
4908489BB08170814193673125536731395Mouseregion
4917974MHAa84d1.seq18693697907636979261Mouseregion
4917388MHAa21d4.seq17993493618534936363Mouseregion
4908483AW98611213893512654435126681Mouseregion
4918641U3199215193669866936698820Mouseregion
4936210RH12429219893677968236779879Mouseregion
4947743UniSTS:23608921393556691035567122Mouseregion
4947745UniSTS:23609118693673246936732654Mouseregion
4936928RH12465324793518459335184839Mouseregion
4937206RH12479319293673129636731486Mouseregion
4930290D9Mit12714593545218235452326Mouseregion
4930294D9Mit12814293682748436827625Mouseregion
4930507D9Mit22411193682494736825057Mouseregion
4933739C7657811893527571435275831Mouseregion
4933741AF0908668993550421635504304Mouseregion
4936412RH12439315793721659537216751Mouseregion
4936412RH12439315793721659537216730Mouseregion
4939055RH12579914193512444735124587Mouseregion
4939887A630095E13Rik5293663851636638567Mouseregion
4930567D9Mit24714993713290737133055Mouseregion
4930837D9Mit6612493492645234926575Mouseregion
7198483Hyls154793556121035561756Mouseregion
4930511D9Mit225.211093536952435369634Mouseregion
4930513D9Mit22632193654604836546368Mouseregion
4930583D9Mit25211593696913636969250Mouseregion
4930839D9Mit6712093703211037032229Mouseregion
4930890D9Mit9113193724206637242196Mouseregion
4947741UniSTS:23608820193550464735504847Mouseregion
4947753UniSTS:23609520793723080537231011Mouseregion
4947757UniSTS:23609735793689232636892682Mouseregion
4948669UniSTS:23663139393521398935214883Mouseregion
4954260D9Mit20519193729832437298517Mouseregion
4955379RH12599920293527575535275956Mouseregion
4962942RH14191316593512448235124646Mouseregion
4952702PMC126621P128093505419935054478Mouseregion
5012821AU04858113993514330135143439Mouseregion
5004698Siat4c45093505312535054753Mouseregion
5009983Ei2415693677924936779405Mouseregion
4972235mAcrv139693669430436694699Mouseregion
4983692PMC316686P127993672580236726080Mouseregion
4983696PMC316691P191593672583636726750Mouseregion
5002280D9Mit217493739490137395074Mouseregion
5006325Acrv113293669869236698824Mouseregion
5001273RH4797616193556554535565705Mouseregion
5001459D11S3963E10993687875236878860Mouseregion
5001513GDB:19786315093521395735214237Mouseregion
5134416Chek119393671011536710307Mouseregion
5494329UniSTS:23663031793521125835212432Mouseregion

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756137395074Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9999947243999472Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91245867446458818Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91347987947479879Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91550045549500594Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91550045549500594Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91550045549500594Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91550045549500594Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91583833149838331Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91583833149838331Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91583833149838331Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91610000050100000Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91610000050100000Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91679834550798345Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91706754451067647Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined92003211054032229Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92024206654242196Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92039490154395074Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92039490154395074Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92039490154395074Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92039490154395074Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92094144454941444Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92500000069000000Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92567618959676285Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92567618959676285Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92567618959676285Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92567618959676285Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92688512460885255Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92688512460885255Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92688512460885255Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92733989761340026Mouse
14700787Ncdq1_mnevus cell density QTL 1 (mouse)92820000036200000Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92859203741888030Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92938163163381774Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92938163163381774Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93014186664141979Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93050339840654618Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93082861764828723Mouse
4142455Elnv_mepilepsy naive (mouse)Not determined93136026237395074Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93252326366523557Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93254112166541246Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93259987266600121Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93297840266978536Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93319972567199840Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93406754473531973Mouse
1357682Phdlc1_mplasma HDL cholesterol 1 (mouse)Not determined93419332342853570Mouse
1300868Tlf_mT lymphocyte fraction (mouse)Not determined93492645237395074Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93512317869123299Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93512317869123299Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93512317869123299Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93682494749509211Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93703211050199840Mouse
1301007Pid2_mprion incubation determinant 2 (mouse)Not determined93724206644340026Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93739490198819654Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:109546

RGD Curation Notes
Note Type Note Reference