Nucleotide Sequences
QTLs in Region (mRatBN7.2)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 1358356 | Srcrt1 | Stress Responsive Cort QTL1 | 3.66 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 2 | 161699179 | 222436696 | Rat | 1331734 | Bp204 | Blood pressure QTL 204 | 3.61192 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 168358098 | 223265385 | Rat | 2301408 | Kidm36 | Kidney mass QTL 36 | 0.002 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 2 | 190613715 | 226808892 | Rat | 1598813 | Memor9 | Memory QTL 9 | 2.7 | exploratory behavior trait (VT:0010471) | average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) | 2 | 199341726 | 234244620 | Rat | 8693697 | Alc36 | Alcohol consumption QTL 36 | 2 | 0.592 | drinking behavior trait (VT:0001422) | calculated ethanol drink intake rate (CMO:0001615) | 2 | 217139753 | 236660713 | Rat | 1331794 | Bp202 | Blood pressure QTL 202 | 3.66819 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 141194931 | 223265385 | Rat | 1298075 | Scl17 | Serum cholesterol level QTL 17 | 3.4 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 2 | 211744537 | 249053267 | Rat | 1331805 | Cm29 | Cardiac mass QTL 29 | 3.50746 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 2 | 141194931 | 223265385 | Rat | 1354648 | Bp239 | Blood pressure QTL 239 | 0.001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 66118463 | 226797303 | Rat | 2298479 | Eau5 | Experimental allergic uveoretinitis QTL 5 | 0.0021 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 2 | 202446871 | 237938339 | Rat | 1354649 | Kidm17 | Kidney mass QTL 17 | 2.9 | kidney mass (VT:0002707) | calculated kidney weight (CMO:0000160) | 2 | 81754530 | 227146641 | Rat | 1300126 | Bp175 | Blood pressure QTL 175 | 3.46 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 214226044 | 247136170 | Rat | 10755499 | Bp389 | Blood pressure QTL 389 | 2.61 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 18960362 | 228801039 | Rat | 7207484 | Bss108 | Bone structure and strength QTL 108 | 5.3 | femur strength trait (VT:0010010) | femur total energy absorbed before break (CMO:0001677) | 2 | 211744537 | 249053267 | Rat | 2313073 | Bmd75 | Bone mineral density QTL 75 | 4.1 | 0.0001 | tibia mineral mass (VT:1000283) | total volumetric bone mineral density (CMO:0001728) | 2 | 215377404 | 237938339 | Rat | 738013 | Alc15 | Alcohol consumption QTL 15 | 4.1 | 0.00022 | consumption behavior trait (VT:0002069) | ethanol drink intake rate to body weight ratio (CMO:0001616) | 2 | 184165752 | 229165752 | Rat | 61398 | Bp50 | Blood pressure QTL 50 | 4.4 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 189599258 | 234599258 | Rat | 7207482 | Bss107 | Bone structure and strength QTL 107 | 7 | femur strength trait (VT:0010010) | femur ultimate force (CMO:0001675) | 2 | 211744537 | 249053267 | Rat | 2317752 | Glom23 | Glomerulus QTL 23 | 3.6 | urine protein amount (VT:0005160) | urine protein level (CMO:0000591) | 2 | 193452645 | 245889826 | Rat | 1549836 | Bss2 | Bone structure and strength QTL 2 | 7.5 | femur strength trait (VT:0010010) | femur midshaft polar moment of inertia (CMO:0001669) | 2 | 211744537 | 249053267 | Rat | 1641925 | Alcrsp2 | Alcohol response QTL 2 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 2 | 149559561 | 221167075 | Rat | 2317885 | Alcrsp28 | Alcohol response QTL 28 | 2.1 | 0.63 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 2 | 212828222 | 249053267 | Rat | 1581499 | Esta2 | Estrogen-induced thymic atrophy QTL 2 | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 2 | 189599258 | 226936289 | Rat | 1331767 | Hrtrt12 | Heart rate QTL 12 | 3.373 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 2 | 218414747 | 240841241 | Rat | 9589044 | Scfw1 | Subcutaneous fat weight QTL 1 | 5.8 | 0.001 | subcutaneous adipose mass (VT:1000472) | abdominal subcutaneous fat pad weight (CMO:0002069) | 2 | 182171407 | 227171407 | Rat | 8694435 | Bw166 | Body weight QTL 166 | 14.08 | 0.001 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 2 | 182171407 | 227171407 | Rat | 61417 | Cia10 | Collagen induced arthritis QTL 10 | 3.4 | joint integrity trait (VT:0010548) | experimental arthritis severity measurement (CMO:0001459) | 2 | 179946951 | 224946951 | Rat | 1354622 | Kidm16 | Kidney mass QTL 16 | 3 | kidney mass (VT:0002707) | left kidney wet weight (CMO:0000083) | 2 | 81754530 | 222436696 | Rat | 2293833 | Kiddil8 | Kidney dilation QTL 8 | 2.9 | kidney pelvis morphology trait (VT:0004194) | hydronephrosis severity score (CMO:0001208) | 2 | 219753301 | 247136170 | Rat | 8694383 | Bw158 | Body weight QTL 158 | 7.69 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 2 | 182171407 | 227171407 | Rat | 1598835 | Anxrr18 | Anxiety related response QTL 18 | 2.98 | body movement coordination trait (VT:0005424) | number of rearing movements in an experimental apparatus (CMO:0001752) | 2 | 200990457 | 245990457 | Rat | 7207490 | Bss111 | Bone structure and strength QTL 111 | 6.4 | femur morphology trait (VT:0000559) | femur midshaft cortical cross-sectional area (CMO:0001663) | 2 | 211744537 | 249053267 | Rat | 8693622 | Alc26 | Alcohol consumption QTL 26 | 2.4 | 0.667 | drinking behavior trait (VT:0001422) | calculated ethanol drink intake rate (CMO:0001615) | 2 | 221136523 | 241305619 | Rat | 2306901 | Bp337 | Blood pressure QTL 337 | 0.01 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 164073756 | 227146641 | Rat | 8694194 | Abfw1 | Abdominal fat weight QTL 1 | 11.7 | 0.001 | visceral adipose mass (VT:0010063) | abdominal fat pad weight to body weight ratio (CMO:0000095) | 2 | 182171407 | 227171407 | Rat | 61366 | Iddm3 | Insulin dependent diabetes mellitus QTL 3 | 4.7 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 2 | 189599258 | 234599258 | Rat | 2293844 | Kiddil7 | Kidney dilation QTL 7 | 3.5 | kidney pelvis morphology trait (VT:0004194) | hydronephrosis severity score (CMO:0001208) | 2 | 219753301 | 247136170 | Rat | 1641891 | Alcrsp17 | Alcohol response QTL 17 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 2 | 149559561 | 249053267 | Rat | 724534 | Uae6 | Urinary albumin excretion QTL 6 | 10 | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 2 | 78665619 | 249053267 | Rat | 2300189 | Bmd48 | Bone mineral density QTL 48 | 5.8 | 0.0001 | femur mineral mass (VT:0010011) | volumetric bone mineral density (CMO:0001553) | 2 | 179335906 | 224335906 | Rat | 8662843 | Vetf9 | Vascular elastic tissue fragility QTL 9 | 2.05 | thoracic aorta molecular composition trait (VT:0010568) | aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003) | 2 | 157142078 | 226277316 | Rat | 1359019 | Hrtrt19 | Heart rate QTL 19 | 2.9 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 2 | 219753301 | 226277316 | Rat | |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
dbSNP (RS) | rs105495306 | |
dbSNP (SS) | ss179345856 | |
ss181762318 | ||
ss91023809 | ||
Ensembl SNP | rs105495306 |