rs63999739 Marker Search Result - Rat Genome Database

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General

Marker: rs63999739

Symbol:

rs63999739

Previously known as:

Cpn_2240243053; ENSRNOSNP2787247; ENSRNOSNP2702706; ENSRNOSNP1333759; ENSEMBL|tmpshr704219;

RGD ID:

8663448

Type:

SNV

Expected Size:

0 (bp)

Notes

A/T

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	2	247,881,962 - 247,881,962	RGD	Rnor6.0
Rnor_5.0	2	266,412,984 - 266,412,984	RGD	Rnor5.0
RGSC_v3.4	2	240,243,053 - 240,243,053	RGD	RGSC3.4
Celera	2	223,073,568 - 223,073,568	RGD

Is Marker For:

QTLs: Alc26

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Morton Printz	Personal communication between Dr. Printz and the RGD curators.
2.	Is the Alcohol Deprivation Effect Genetically Mediated? Studies with HXB/BXH Recombinant Inbred Rat Strains.	Vanderlinden LA, etal., Alcohol Clin Exp Res. 2014 Jun 24. doi: 10.1111/acer.12471.

Strains and Sequence

Region

Nucleotide Sequences

Additional Information

External Database Links

Database	Acc Id	Source(s)
dbSNP (RS)	rs63999739
dbSNP (SS)	ss179345957
	ss197070256
	ss87346002
	ss91049802
Ensembl SNP	rs63999739

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Marker: rs63999739