Scn1a Marker Search Result - Rat Genome Database

Symbol:

Scn1a

Previously known as:

Scn3a; Scn2a1;

RGD ID:

7204204

Expected Size:

662 (bp)

Position

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	11	E1	UniSTS
Cytogenetic Map	2	C1.3	UniSTS

Is Marker For:

Genes: Scn1a Scn4a Scn3a Scn2a

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


RefSeq Transcripts	NM_001099298.2	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_018732.3	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_018733.2	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_133199.2	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ278787.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ810515.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ810516.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ810517.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC129805.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF591872.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L42339.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L42341.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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