SGC31090 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: SGC31090

Symbol: SGC31090
Previously known as: WI-31090; EST388837; 
RGD ID: 5127650
Expected Size: 150 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372206,628,568 - 206,630,255UniSTSGRCh37
Celera2200,386,332 - 200,388,021UniSTS
Cytogenetic Map2q33.3UniSTS
HuRef2198,477,095 - 198,478,784UniSTS
GeneMap99-GB4 RH Map2635.31UniSTS
Whitehead-RH Map2957.3UniSTS
Is Marker For: Genes:   NRP2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GAGAGCAAGTTGCTGTGGGT
Reverse Primer TGTCATCAATGGCAATCTCTC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_003872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC007362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF016098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF022859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF022860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF280544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF280545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF281074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC104770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV177788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV177912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX537423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001610.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ030487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  H86528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976313.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 8828 UniSTS
UniSTS 44054 UniSTS