AI008709 Marker Search Result - Rat Genome Database

Symbol:

AI008709

Previously known as:

RGD ID:

5087173

Expected Size:

189 (bp)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	18	72,334,056 - 72,334,284	NCBI	Rnor5.0
Rnor_5.0	3	45,614,428 - 45,614,617	NCBI	Rnor5.0
Rnor_5.0	18	75,992,053 - 75,992,281	NCBI	Rnor5.0
RGSC_v3.4	3	36,560,849 - 36,561,037	UniSTS	RGSC3.4
RGSC_v3.4	18	76,893,048 - 76,893,275	UniSTS	RGSC3.4
Celera	3	37,575,429 - 37,575,617	UniSTS
Celera	18	71,918,312 - 71,918,539	UniSTS
RH 3.4 Map	18	812.7	UniSTS
Cytogenetic Map	2	q34	UniSTS
Cytogenetic Map	3	q12	UniSTS
Cytogenetic Map	18	q12.3	UniSTS

Is Marker For:

Genes: Galnt13 Mrps21l Mrps21 LOC100361350 LOC100911433

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


RefSeq Transcripts	NM_001126094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001057655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003751805.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_344706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AP012456.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC166891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ210042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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