RH139671 Marker Search Result - Rat Genome Database

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Marker: RH139671

Symbol: RH139671
Previously known as: AI105340; 
RGD ID: 5077290
Expected Size: 217 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.213103,363,612 - 103,363,829 (+)MAPPERmRatBN7.2
Rnor_6.013110,469,115 - 110,469,331NCBIRnor6.0
Rnor_5.013115,029,920 - 115,030,136UniSTSRnor5.0
RGSC_v3.413107,852,602 - 107,852,818UniSTSRGSC3.4
Celera13102,803,956 - 102,804,172UniSTS
RH 3.4 Map13749.0UniSTS


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCAGACCACACAGAGCTCAACT
Reverse Primer TGTGGTGCACAAATTCTTTCTGT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1585897Lpgat1lysophosphatidylglycerol acyltransferase 113103294622103365372Rat
7695506LOC102555670uncharacterized LOC10255567013103363777103379226Rat

Nucleotide Sequences
GenBank Nucleotide CH473985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat


Additional Information

Database Acc Id Source(s)
UniSTS 221755 UniSTS