RH138681 Marker Search Result - Rat Genome Database

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Marker: RH138681

Symbol: RH138681
Also known as:
RGD ID: 5075588
Expected Size: 171 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.253,443,706 - 3,443,875 (+)MAPPERmRatBN7.2
Rnor_6.052,854,059 - 2,854,227NCBIRnor6.0
Rnor_5.052,843,754 - 2,843,922UniSTSRnor5.0
RGSC_v3.452,557,518 - 2,557,686UniSTSRGSC3.4
Celera53,039,738 - 3,039,906UniSTS
Cytogenetic Map5q11UniSTS
Is Marker For: Genes:   Terf1  


Annotation


References - curated
1. RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AACACACATTCCCTCTCTCTTTCA
Reverse Primer GCTCATTAGCTGAGACTCCGAA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1311574Terf1telomeric repeat binding factor 1534431033472377Rat

Nucleotide Sequences
RefSeq Transcripts NM_001012464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC089888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
631551Vetf1Vascular elastic tissue fragility QTL 150.0001aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)522822265904428Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 297758 UniSTS
UniSTS 220768 UniSTS