AI511027 Marker Search Result - Rat Genome Database

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Marker: AI511027

Symbol: AI511027
Previously known as:
RGD ID: 5057092
Expected Size: 187 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X68,496,912 - 68,497,099 (+)MAPPERmRatBN7.2
Rnor_6.0X74,346,487 - 74,346,673NCBIRnor6.0
Rnor_5.0X75,151,703 - 75,151,889UniSTSRnor5.0
RGSC_v3.4X91,467,949 - 91,468,135UniSTSRGSC3.4
CeleraX69,864,392 - 69,864,578UniSTS


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCTGTGTGTGGTGGACTTACCT
Reverse Primer AACCCAGATGGGCAAGTTTAGA
 

Region

Nucleotide Sequences
GenBank Nucleotide CH473969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat


Additional Information

Database Acc Id Source(s)
UniSTS 239661 UniSTS