Nucleotide Sequences
QTLs in Region (mRatBN7.2)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 1576314 | Eutr1 | Estrogen induced uterine response QTL 1 | uterus integrity trait (VT:0010575) | pyometritis severity score (CMO:0002009) | 5 | 2138965 | 166875058 | Rat | 1549845 | Scl44 | Serum cholesterol level QTL 44 | 6 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 5 | 40128307 | 148607290 | Rat | 1578766 | Tcas11 | Tongue tumor susceptibility QTL 11 | 4.12 | tongue integrity trait (VT:0010553) | number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) | 5 | 46711509 | 161317411 | Rat | 61393 | Bp7 | Blood pressure QTL 7 | 4.5 | 0.0001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 60293434 | 161481680 | Rat | 1354598 | Srn6 | Serum renin concentration QTL 6 | 3.8 | blood renin amount (VT:0003349) | plasma renin activity level (CMO:0000116) | 5 | 69540295 | 151018848 | Rat | 1302790 | Scl20 | Serum cholesterol level QTL 20 | 6.4 | 0.0001 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 82394392 | 166664054 | Rat | 1331796 | Thshl2 | Thyroid stimulating hormone level QTL 2 | 2.3 | blood thyroid-stimulating hormone amount (VT:0005119) | serum thyroid stimulating hormone level (CMO:0001248) | 5 | 97059760 | 147465714 | Rat | 1358187 | Emca1 | Estrogen-induced mammary cancer QTL 1 | 4.4 | mammary gland integrity trait (VT:0010552) | post-insult time to mammary tumor formation (CMO:0000345) | 5 | 99216724 | 148607142 | Rat | 1578673 | Bmd13 | Bone mineral density QTL 13 | 4.9 | femur mineral mass (VT:0010011) | trabecular volumetric bone mineral density (CMO:0001729) | 5 | 103689353 | 148689353 | Rat | 2317056 | Wbc3 | White blood cell count QTL 3 | 2.51 | 0.01 | leukocyte quantity (VT:0000217) | white blood cell count (CMO:0000027) | 5 | 105999803 | 150999803 | Rat | 7207488 | Bss110 | Bone structure and strength QTL 1 | 8.4 | femur strength trait (VT:0010010) | femur stiffness (CMO:0001674) | 5 | 106906205 | 151906205 | Rat | 7207491 | Bss112 | Bone structure and strength QTL 112 | 7 | femur morphology trait (VT:0000559) | femur midshaft cortical cross-sectional area (CMO:0001663) | 5 | 106906205 | 151906205 | Rat | 7207481 | Bss106 | Bone structure and strength QTL 106 | 7.9 | femur strength trait (VT:0010010) | femur ultimate force (CMO:0001675) | 5 | 106906205 | 151906205 | Rat | 7207486 | Bss109 | Bone structure and strength QTL 109 | femur strength trait (VT:0010010) | femur total energy absorbed before break (CMO:0001677) | 5 | 106906205 | 151906205 | Rat | 1549838 | Bss4 | Bone structure and strength QTL 4 | 9.2 | femur strength trait (VT:0010010) | femur midshaft polar moment of inertia (CMO:0001669) | 5 | 106906205 | 151906205 | Rat | 1298089 | Scl14 | Serum cholesterol level QTL 14 | 5.8 | 0.0004 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 108845856 | 153845856 | Rat | 1598847 | Cm62 | Cardiac mass QTL 62 | 3.4 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 5 | 108845856 | 153845856 | Rat | 8657050 | Bw146 | Body weight QTL 146 | 19.84 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 5 | 108938288 | 153938288 | Rat | 8694441 | Bw169 | Body weight QTL 169 | 17.61 | 0.001 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 5 | 111416838 | 156416838 | Rat | 8694198 | Abfw3 | Abdominal fat weight QTL 3 | 16.13 | 0.001 | visceral adipose mass (VT:0010063) | abdominal fat pad weight to body weight ratio (CMO:0000095) | 5 | 111416838 | 156416838 | Rat | 8694389 | Bw160 | Body weight QTL 160 | 6.17 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 5 | 111416838 | 156416838 | Rat | 8552960 | Pigfal15 | Plasma insulin-like growth factor 1 level QTL 15 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 5 | 111416838 | 156416838 | Rat | 2293642 | Bss37 | Bone structure and strength QTL 37 | 4.64 | 0.0001 | femur strength trait (VT:0010010) | femur ultimate force (CMO:0001675) | 5 | 120740824 | 151018848 | Rat | 1641920 | Colcs1 | Colorectal carcinoma susceptibility QTL 1 | 2.99 | 0.0055 | intestine integrity trait (VT:0010554) | benign colorectal tumor surface area measurement (CMO:0001799) | 5 | 121846814 | 166846814 | Rat | 10053720 | Scort26 | Serum corticosterone level QTL 26 | 2.06 | 0.0147 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 5 | 124965598 | 166875058 | Rat | 724525 | Bp147 | Blood pressure QTL 147 | 4.3 | 0.0001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 126424772 | 166875058 | Rat | 1598819 | Bp292 | Blood pressure QTL 292 | 4.3 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 127798274 | 166875058 | Rat | 1598861 | Cm64 | Cardiac mass QTL 64 | 2.9 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 5 | 127798274 | 166875058 | Rat | 8552908 | Pigfal4 | Plasma insulin-like growth factor 1 level QTL 4 | 6.6 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 5 | 128506074 | 166875058 | Rat | 8694169 | Bw148 | Body weight QTL 148 | 5 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 5 | 128506074 | 166875058 | Rat | 634349 | Bp139 | Blood pressure QTL 139 | 0.001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 128924607 | 166875058 | Rat | 70156 | Niddm30 | Non-insulin dependent diabetes mellitus QTL 30 | 3.98 | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 5 | 129132447 | 151006154 | Rat | 738018 | Anxrr4 | Anxiety related response QTL 4 | 5.1 | exploratory behavior trait (VT:0010471) | percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) | 5 | 130130159 | 166875058 | Rat | 7794791 | Mcs33 | Mammary carcinoma susceptibility QTL 33 | 1.93 | mammary gland integrity trait (VT:0010552) | mammary tumor incidence/prevalence measurement (CMO:0000946) | 5 | 131345754 | 166875058 | Rat | 631505 | Bp103 | Blood pressure QTL 103 | 3.2 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 5 | 132717196 | 165560427 | Rat | 631562 | Apr2 | Acute phase response QTL 2 | 3.7 | blood murinoglobulin 1 amount (VT:0010597) | plasma murinoglobulin 1 level (CMO:0001931) | 5 | 135927956 | 166875058 | Rat | 61444 | Strs2 | Sensitivity to stroke QTL 2 | 4.7 | cerebrum integrity trait (VT:0010549) | post-insult time to onset of cerebrovascular lesion (CMO:0002343) | 5 | 135929696 | 166875058 | Rat | 1331721 | Bp210 | Blood pressure QTL 210 | 3.413 | arterial blood pressure trait (VT:2000000) | blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) | 5 | 143069996 | 166846814 | Rat | 2302369 | Scl60 | Serum cholesterol level QTL 60 | 3.13 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 5 | 143608201 | 161165651 | Rat | 631263 | Cm24 | Cardiac mass QTL 24 | 3.5 | heart mass (VT:0007028) | heart left ventricle weight to body weight ratio (CMO:0000530) | 5 | 143799107 | 158428037 | Rat | 1300119 | Bp180 | Blood pressure QTL 180 | 3.82 | arterial blood pressure trait (VT:2000000) | blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) | 5 | 144358090 | 157869054 | Rat | 2313096 | Bmd78 | Bone mineral density QTL 78 | 3.1 | 0.0001 | tibia mineral mass (VT:1000283) | total volumetric bone mineral density (CMO:0001728) | 5 | 144377876 | 161317411 | Rat | 70202 | Alc19 | Alcohol consumption QTL 19 | 2.5 | drinking behavior trait (VT:0001422) | ethanol intake volume to total fluid intake volume ratio (CMO:0001591) | 3 | 1 | 27494778 | Rat | 631679 | Cm10 | Cardiac mass QTL 10 | 7.34 | 0.0001 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 1 | 31158234 | Rat | 631831 | Alc8 | Alcohol consumption QTL 8 | 2.7 | consumption behavior trait (VT:0002069) | calculated ethanol drink intake rate (CMO:0001615) | 3 | 1 | 33230976 | Rat | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | blood pressure trait (VT:0000183) | diastolic blood pressure (CMO:0000005) | 3 | 1 | 33278763 | Rat | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | blood pressure trait (VT:0000183) | systolic blood pressure (CMO:0000004) | 3 | 1 | 33278763 | Rat | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | blood pressure trait (VT:0000183) | pulse pressure (CMO:0000292) | 3 | 1 | 33278763 | Rat | 631545 | Bp85 | Blood pressure QTL 85 | 3.1 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 1 | 33278763 | Rat | 4889966 | Bss95 | Bone structure and strength QTL 95 | 4.4 | tibia area (VT:1000281) | tibia-fibula cross-sectional area (CMO:0001718) | 3 | 1 | 36847613 | Rat | 2312664 | Scl62 | Serum cholesterol level QTL 62 | 0.05 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 3 | 1 | 38710544 | Rat | 631568 | Bp92 | Blood pressure QTL 92 | 2.2 | 0.005 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 1 | 39874793 | Rat | 2290452 | Scl56 | Serum cholesterol level QTL 56 | 2.26 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 3 | 1 | 91609953 | Rat | 1298526 | Arunc3 | Aerobic running capacity QTL 3 | 2.2 | exercise endurance trait (VT:0002332) | maximum distance run on treadmill (CMO:0001406) | 3 | 8227194 | 33703538 | Rat | 10401810 | Kidm53 | Kidney mass QTL 53 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 8227194 | 47233430 | Rat | 70203 | Gcr2 | Gastric cancer resistance QTL 2 | 2.6 | stomach morphology trait (VT:0000470) | stomach tumor susceptibility score (CMO:0002043) | 3 | 8658162 | 27494778 | Rat | 1358357 | Srcrtb1 | Stress Responsive Cort Basal QTL 1 | 6.36 | 0.002 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 3 | 8658162 | 27494778 | Rat | 6893355 | Bw101 | Body weight QTL 101 | 0.4 | 0.38 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 10778704 | 30357018 | Rat | 6893363 | Bw105 | Body weight QTL 105 | 2.6 | 0.0036 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 10778704 | 30357018 | Rat | 1558654 | Bw56 | Body weight QTL 56 | 4.5 | 0.0000171 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 10778704 | 30357018 | Rat | 70191 | BpQTLcluster4 | Blood pressure QTL cluster 4 | 3 | arterial blood pressure trait (VT:2000000) | absolute change in mean arterial blood pressure (CMO:0000533) | 3 | 10778704 | 50302886 | Rat | 70191 | BpQTLcluster4 | Blood pressure QTL cluster 4 | 3 | arterial blood pressure trait (VT:2000000) | absolute change in systolic blood pressure (CMO:0000607) | 3 | 10778704 | 50302886 | Rat | 1558647 | Cm46 | Cardiac mass QTL 46 | 5.4 | 0.0000055 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 10778823 | 30356773 | Rat | 1558650 | Cm48 | Cardiac mass QTL 48 | 4 | 0.0001 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 3 | 10778823 | 30356773 | Rat | 1558657 | Cm43 | Cardiac mass QTL 43 | 6.6 | 0.0000000293 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 10778823 | 30356773 | Rat | 1358905 | Hrtrt17 | Heart rate QTL 17 | 5.9 | 0.000014 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 3 | 10861912 | 89878372 | Rat | 1358885 | Bp251 | Blood pressure QTL 251 | 3.8 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 14489145 | 121056321 | Rat | 1358888 | Bp264 | Blood pressure QTL 264 | 4.43 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 14489145 | 121056321 | Rat | 2298542 | Neuinf11 | Neuroinflammation QTL 11 | 3.9 | nervous system integrity trait (VT:0010566) | spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) | 3 | 15005422 | 76927699 | Rat | |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
NCBI Gene | 499779 | UniSTS |
502987 | UniSTS | |
UniSTS | 212134 | UniSTS |