RH128359 Marker Search Result - Rat Genome Database

Symbol:

RH128359

Previously known as:

AA899522;

RGD ID:

5040570

Expected Size:

186 (bp)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	110,892,120 - 110,892,306 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	119,325,433 - 119,325,618	NCBI	Rnor6.0
Rnor_5.0	9	118,779,767 - 118,779,952	UniSTS	Rnor5.0
RGSC_v3.4	9	110,190,181 - 110,190,366	UniSTS	RGSC3.4
Celera	9	108,022,327 - 108,022,512	UniSTS
Cytogenetic Map	9	q38	UniSTS

Is Marker For:

Genes: Myl12a

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Genes in Region

The following Genes overlap with this region.

RGD ID	Symbol	Name	Chr	Start	Stop	Species
1309537	Myl12a	myosin light chain 12A	9	110891970	110899655	Rat

Nucleotide Sequences


RefSeq Transcripts	NM_001135017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	FQ212603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ215121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ215776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH616874.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X05566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X54617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
1354626	Bvd1	Brain ventricular dilatation QTL 1	3.73	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	9	75712843	111552878	Rat
7794784	Mcs31	Mammary carcinoma susceptibility QTL 31	2.98		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	9	77813894	111552878	Rat

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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