Rab7-ps1 Marker Search Result - Rat Genome Database

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Marker: Rab7-ps1

Symbol: Rab7-ps1
Previously known as:
RGD ID: 5036472
Expected Size: 231 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24120,462,698 - 120,462,929 (+)MAPPERmRatBN7.2
mRatBN7.2496,474,285 - 96,474,514 (+)MAPPERmRatBN7.2
Rnor_6.0498,100,457 - 98,100,685NCBIRnor6.0
Rnor_6.04119,911,199 - 119,911,429NCBIRnor6.0
Rnor_5.04185,159,082 - 185,159,312UniSTSRnor5.0
Rnor_5.04162,886,071 - 162,886,299UniSTSRnor5.0
RGSC_v3.44122,203,418 - 122,203,648UniSTSRGSC3.4
RGSC_v3.4496,977,370 - 96,977,598UniSTSRGSC3.4
Celera491,166,331 - 91,166,559UniSTS
Celera4109,422,096 - 109,422,326UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map4q31UniSTS
Is Marker For: Genes:   Rab7a   Il12rb2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TAACATGTACTATAAGATTCTT
Reverse Primer TTCACAGTTCATCTGTGTCTAA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3552Reg1aregenerating family member 1 alpha4110892451110895115Rat
62022Tmsb10thymosin, beta 104105009959105011095Rat
2316Cd8aCD8 subunit alpha4103365804103370041Rat
2317Cd8bCD8 subunit beta4103312596103328523Rat
70884Eif2ak3eukaryotic translation initiation factor 2 alpha kinase 34102805495102866914Rat
619998Tmem150atransmembrane protein 150A4104410271104414630Rat
3256Reg3gregenerating family member 3 gamma4110922805110927803Rat
2797Hk2hexokinase 24115234509115283530Rat
620026Il12rb2interleukin 12 receptor subunit beta 249642639696515251Rat
2042Add2adducin 24118444594118538505Rat
621062Clec4fC-type lectin domain family 4, member F4116129023116138744Rat
708443Prokr1prokineticin receptor 14120022301120033367Rat
621133Vax2ventral anterior homeobox 24116195528116219597Rat
621700Sftpbsurfactant protein B4104359303104368439Rat
3811Tacr1tachykinin receptor 14114920844115089733Rat
620419Vamp5vesicle-associated membrane protein 54104423813104435059Rat
2590Fabp1fatty acid binding protein 14103191015103194791Rat
620468Igkv28immunoglobulin kappa chain variable 284101302903101303452Rat
727874Rtknrhotekin4115640813115657952Rat
621605Nat8bN-acetyltransferase 8B4118359445118364351Rat
620445Tgoln2trans-golgi network protein 24104663356104671208Rat
620421Vamp8vesicle-associated membrane protein 84104442383104452884Rat
2546Egr4early growth response 44118047869118050328Rat
628802Retsatretinol saturase4104653306104662069Rat
631379Cyp26b1cytochrome P450, family 26, subfamily b, polypeptide 14117041808117058628Rat
68383Ggcxgamma-glutamyl carboxylase4104469737104485631Rat
619821Suclg1succinate-CoA ligase GDP/ADP-forming subunit alpha4105308236105337595Rat
708351Kdm3alysine demethylase 3A4103630907103675073Rat
621609Nat8N-acetyltransferase 84118279521118284671Rat
621607Nat8f3N-acetyltransferase 8 (GCN5-related) family member 34118241792118246010Rat
735014Gkn1gastrokine 14119790101119795389Rat
1304825Fam136afamily with sequence similarity 136, member A4118805129118811046Rat
621171Anxa4annexin A44119184378119241183Rat
620586Rnf103ring finger protein 1034103526456103542529Rat
628706Sfxn5sideroflexin 54117750213117869826Rat
620875St3gal5ST3 beta-galactoside alpha-2,3-sialyltransferase 54104134613104192558Rat
1303009Slc4a5solute carrier family 4 member 54115710101115810330Rat
708556Chmp3charged multivesicular body protein 34103576453103622566Rat
3254Reg3bregenerating family member 3 beta4110861775110865015Rat
621606Nat8f1N-acetyltransferase 8 (GCN5-related) family member 14118336208118342923Rat
621401Reg3aregenerating islet-derived 3 alpha4110872398110875157Rat
69240Mogsmannosyl-oligosaccharide glucosidase4115621623115625026Rat
621610Nat8f5N-acetyltransferase 8 (GCN5-related) family member 54118260323118285038Rat
621797Dnah6dynein, axonemal, heavy chain 64105064123105284361Rat
3849Tgfatransforming growth factor alpha4118618043118700897Rat
61908Rab7aRAB7A, member RAS oncogene family4120461966120510756Rat
620824Polr1aRNA polymerase I subunit A4103950051104014022Rat
628652Pcyox1prenylcysteine oxidase 14118832114118842951Rat
621807CnbpCCHC-type zinc finger, nucleic acid binding protein4120302768120311694Rat
62038Dctn1dynactin subunit 14115671024115703824Rat
1305851Tex261testis expressed 2614116253547116260730Rat
1304792Gcfc2GC-rich sequence DNA-binding factor 24114481613114519268Rat
1304799Dguokdeoxyguanosine kinase4115987101116014733Rat
1307014Mob1aMOB kinase activator 1A4115831581115848561Rat
1305742Tia1TIA1 cytotoxic granule-associated RNA binding protein4118852765118883252Rat
1305105Smyd1SET and MYND domain containing 14103195330103252989Rat
1306408Elmod3ELMO domain containing 34104614665104653122Rat
1306746C4h2orf42similar to human chromosome 2 open reading frame 424118887688118916808Rat
1306422Cct7chaperonin containing TCP1 subunit 74117989232118006478Rat
1307065Mrpl35mitochondrial ribosomal protein L354103865812103876687Rat
1305057NagkN-acetylglucosamine kinase4116281179116293870Rat
1305060Ctnna2catenin alpha 24109294249110443409Rat
1307688Isy1ISY1 splicing factor homolog4120276535120297227Rat
1304961Wbp1WW domain binding protein 14115625168115627567Rat
3753Sprsepiapterin reductase4117671948117676292Rat
1307038Dusp11dual specificity phosphatase 114118367673118385183Rat
2027Actg2actin gamma 2, smooth muscle4116021832116046475Rat
1307793Pole4DNA polymerase epsilon 4, accessory subunit4115165285115171097Rat
1306709Mrpl53mitochondrial ribosomal protein L534115615329115616219Rat
1334150Or6c235-ps1olfactory receptor family 6 subfamily C member 235, pseudogene 14105479255105480121Rat
1309746Zfp638zinc finger protein 6384116355934116475051Rat
1308103Usp39ubiquitin specific peptidase 394104373948104406359Rat
1308906Htra2HtrA serine peptidase 24115556914115560202Rat
1309144Thnsl2threonine synthase-like 24103112974103132122Rat
1309153Smyd5SMYD family member 54117969615117984082Rat
1560707Lrrtm4leucine rich repeat transmembrane neuronal 44112545874113338713Rat
1311724Capgcapping actin protein, gelsolin like4104594743104611856Rat
1309786TprkbTp53rk binding protein4118342910118357908Rat
1549782Pcgf1polycomb group ring finger 14115576165115587019Rat
1310925Snrnp27small nuclear ribonucleoprotein U4/U6.U5 subunit 274119123676119133234Rat
1307823Nfu1NFU1 iron-sulfur cluster scaffold4119458981119480162Rat
1305230Reep1receptor accessory protein 14103746004103862347Rat
1310619Atp6v1b1ATPase H+ transporting V1 subunit B14116223799116242475Rat
1311313Mthfd2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase4115811135115822663Rat
1309499Dok1docking protein 14115537453115540464Rat
1311590Alms1ALMS1, centrosome and basal body associated protein4118125581118226005Rat
1305975Bola3bolA family member 34115853350115862797Rat
1306495Krcc1lysine-rich coiled-coil 14103261642103274672Rat
1307144Antxr1ANTXR cell adhesion molecule 14119590770119778232Rat
1311377Rpiaribose 5-phosphate isomerase A4102723712102749374Rat
1310684Immtinner membrane mitochondrial protein4103880482103919116Rat
619963StambpStam binding protein4116055563116083563Rat
1307930Paip2bpoly(A) binding protein interacting protein 2B4116292001116323387Rat
1305520Aak1AP2 associated kinase 14119300128119451834Rat
1309766Rmnd5arequired for meiotic nuclear division 5 homolog A4103375846103432890Rat
619985Mat2amethionine adenosyltransferase 2A4104489877104495447Rat
1562986Bmp10bone morphogenetic protein 104119872066119877694Rat
1564525Mxd1max dimerization protein 14119097353119118080Rat
1562720Spmip9sperm microtubule inner protein 94102885695102892934Rat
1564754Figlafolliculogenesis specific bHLH transcription factor4118432517118436846Rat
1562258Ino80bINO80 complex subunit B4115627907115631069Rat
1560795Spr-ps1sepiapterin reductase, pseudogene 14117689458117693286Rat
1559797Eva1aeva-1 homolog A, regulator of programmed cell death4114593773114643011Rat
1561547Igkvl16immunoglobulin kappa variable like 164100511688100512362Rat
1561200Ankrd53ankyrin repeat domain 534116245561116253018Rat
1561512Atoh8atonal bHLH transcription factor 84104259992104292168Rat
1561816Foxi3forkhead box I34102933487102937655Rat
1565913Cd207CD207 molecule4116155229116161587Rat
1566019C4h2orf81similar to human chromosome 2 open reading frame 814115661617115667929Rat
1563231Igkv2-112l2immunoglobulin kappa variable 2-112 like 24102208069102208647Rat
1561494Wdr54WD repeat domain 544115654968115677979Rat
1564002Emx1empty spiracles homeobox 14117725148117741616Rat
1359698Rnf181ring finger protein 1814104414586104421433Rat
1560859Asprv1aspartic peptidase, retroviral-like 14119077415119078887Rat
1561779Ccdc142coiled-coil domain containing 1424115606151115616223Rat
1561172Lbx2ladybird homeobox 24115591974115593859Rat
1311011Loxl3lysyl oxidase-like 34115540640115556958Rat
1359498Tacstd2tumor-associated calcium signal transducer 249670795096709650Rat
1311023Dysfdysferlin4116490877116690709Rat
1561319Pcbp1poly(rC) binding protein 14118972698118974705Rat
1311934Gkn2gastrokine 24119778326119824366Rat
1359265Gmcl1germ cell-less 1, spermatogenesis associated4119140598119179891Rat
1311671Tcf7l1transcription factor 7 like 14104680734104846086Rat
1549703Gfpt1glutamine fructose-6-phosphate transaminase 14119496691119546472Rat
1560638Exoc6bexocyst complex component 6B4117094741117550221Rat
1559800Hmces5-hydroxymethylcytosine binding, ES cell specific4120392812120415616Rat
1562105Arhgap25Rho GTPase activating protein 254119896844119974982Rat
1563842M1apmeiosis 1 associated protein4115445910115536745Rat
3658Sema4fssemaphorin 4F4115411411115437721Rat
1587381Mrpl19mitochondrial ribosomal protein L194114521824114526053Rat
1585860Smokxl-ps3sperm motility kinase X like, pseudogene 34117569008117569987Rat
1584754Rpl6-ps15ribosomal protein L6, pseudogene 154108858856108967329Rat
1585901Hnrnpc-ps3heterogeneous nuclear ribonucleoprotein C, pseudogene 34107575688107585650Rat
1586000Rps15-ps12ribosomal protein S15, pseudogene 124116373761116374229Rat
1586001Plin3-ps2perilipin 3, pseudogene 24113755510113756823Rat
1586002Cactin-ps3cactin, spliceosome C complex subunit, pseudogene 34106867095106868859Rat
1586003Igkvl5immunoglobulin kappa variable like 54101805860101806662Rat
1586004Fbl-ps6fibrillarin, pseudogene 64101510664101511950Rat
1583112Pradc1protease-associated domain containing 14117984732117989710Rat
1584713Snrpgsmall nuclear ribonucleoprotein polypeptide G4118812278118819827Rat
1587245Tuba1b-ps8tubulin, alpha 1B, pseudogene 84103340394103341605Rat
1587247Fbl-ps5fibrillarin, pseudogene 54101138821101139593Rat
1587427Sh2d6SH2 domain containing 64104566210104574176Rat
1561722Igkvl2immunoglobulin kappa variable like 249813078798131675Rat
1564696Igkvl6immunoglobulin kappa variable like 64102304440102305139Rat
1566130Fbxo41F-box protein 414118007517118039547Rat
1562910Notonotochord homeobox4117961163117965402Rat
1562515JkamplJNK1/MAPK8 associated membrane protein like4105520442105521542Rat
1565292Copg1COPI coat complex subunit gamma 14120366540120392502Rat
1565582Ptcd3Pentatricopeptide repeat domain 34103922440103957445Rat
1565557Aplfaprataxin and PNKP like factor4120070471120122656Rat
1584384Tma7l1translation machinery associated 7 homolog like 14118986414118988248Rat
1565596H1f10H1.10 linker histone4120440515120441578Rat
1565300Rab43RAB43, member RAS oncogene family4120249650120269174Rat
1561619Nat8f2N-acetyltransferase 8 (GCN5-related) family member 24118319984118323159Rat
1592965Rps27a-ps18ribosomal protein S27a, pseudogene 184115353266115353807Rat
1586368Il23rinterleukin 23 receptor49658056896672540Rat
1590584Tet3tet methylcytosine dioxygenase 34115867412115964433Rat
1585921LRRTM1leucine rich repeat transmembrane neuronal 14109701815109718924Rat
1587471C4h2orf68similar to human chromosome 2 open reading frame 684104402553104408317Rat
1584703Ass1-ps2argininosuccinate synthase 1, pseudogene 24117912849117927565Rat
1588449C17h6orf62-ps1similar to human chromosome 6 open reading frame 62, pseudogene 14101258582101259187Rat
1586032Shc1-ps1SHC adaptor protein 1, pseudogene 14105988811105991749Rat
1586033Ptbp1-ps3polypyrimidine tract binding protein 1, pseudogene 34105696627105698961Rat
1586026Emilin1-ps1elastin microfibril interfacer 1, pseudogene 14118262387118266491Rat
1586028Ldha-ps9lactate dehydrogenase A, pseudogene 94113345717113349041Rat
1592069Rab11fip5RAB11 family interacting protein 54117871301117908819Rat
1591766Dqx1DEAQ box RNA-dependent ATPase 14115563497115572598Rat
1592227Eif5-ps10eukaryotic translation initiation factor 5, pseudogene 104101363702101365081Rat
1596846Rps25-ps8ribosomal protein S25, pseudogene 84115473792115474236Rat
1595506Tlx2T-cell leukemia homeobox 24115573736115576097Rat
1591490Kcmf1potassium channel modulatory factor 14104888452104950234Rat
1591777Aup1AUP1, lipid droplet regulating VLDL assembly factor4115560274115563346Rat
1597311Gtdc1-ps1glycosyltransferase-like domain containing 1, pseudogene 14102443892102445203Rat
1561601Gp9glycoprotein IX (platelet)4120235500120237110Rat
1597754Gkn3gastrokine 34119828859119833924Rat
1596494Efcc1EF-hand and coiled-coil domain containing 14120188202120223464Rat
1595483Rps9-ps10ribosomal protein S9, pseudogene 104113401645113402234Rat
1594207Got2l1glutamatic-oxaloacetic transaminase 2, mitochondrial like 14114189936114190548Rat
2316392Vom1r-ps76vomeronasal 1 receptor pseudogene 764108297905108298689Rat
2319759Tmem94-ps1transmembrane protein 94, pseudogene 14104043649104046004Rat
2319874Reg3b-ps1regenerating family member 3 beta, pseudogene 14110867647110870075Rat
2318882Igkvl13immunoglobulin kappa variable like 134101432815101433399Rat
2319569Igkvl14immunoglobulin kappa variable like 144100487837100488968Rat
2319042Igkv5-45l1immunoglobulin kappa chain variable 5-45 like 14101478715101479376Rat
2320327Igkvl-ps21immunoglobulin kappa variable like, pseudogene 214100209006100209643Rat
2320349Tra2b-ps2transformer 2 beta, pseudogene 24108405683108421146Rat
2321310Igkvl11immunoglobulin kappa variable like 114102343796102344458Rat
2320685Slc25a39-ps8solute carrier family 25 member 39, pseudogene 84107360735107361799Rat
2322825Igkv2-112l1immunoglobulin kappa variable 2-112 like 149780939697810460Rat
2322888Rpl22-ps2ribosomal protein L22, pseudogene 24119350419119350883Rat
2320855Mak16-ps1MAK16 homolog, pseudogene 149936447499369594Rat
2320908Igkvl7immunoglobulin kappa variable like 74102446979102447648Rat
2321092Igkvl1immunoglobulin kappa variable like 149994200399942688Rat
2323358Igkvl3immunoglobulin kappa variable like 349938974799390292Rat
2324329Nat8-ps1N-acetyltransferase 8, pseudogene 14118303631118305781Rat
2323735Gsta4-ps4glutathione S-transferase alpha 4, pseudogene 44120318859120320679Rat
2323785Cfap92cilia and flagella associated protein 924120126565120181575Rat
2324539Igkcl1immunoglobulin kappa constant like 14101065901101066416Rat
6493044LOC100911370uncharacterized LOC1009113704114459942114463108Rat
6495277Igkvl12immunoglobulin kappa variable like 1249800125798002145Rat
6497663LOC100910604uncharacterized LOC1009106044120187658120188705Rat
7524413LOC102546367uncharacterized LOC1025463674104166361104168839Rat
7521956Znf431l-ps5zinc finger protein 431 like, pseudogene 54100210123100220831Rat
7520921Prdx6-ps2peroxiredoxin 6, pseudogene 24114684131114684952Rat
7647571Zmat1l1zinc finger, matrin-type 1 like 14103292937103297980Rat
7650908LOC102548361uncharacterized LOC1025483614115950040115953954Rat
7636572Nat8f4N-acetyltransferase 8 (GCN5-related) family member 44118326092118332591Rat
7639290Phb1-ps4prohibitin 1, pseudogene 44105082392105084201Rat
7547913LOC102549328uncharacterized LOC1025493284118400779118416614Rat
7562795LOC102549458uncharacterized LOC1025494584104767270104769717Rat
7583063LOC102549525uncharacterized LOC1025495254102802796102805439Rat
7552576Stxbp3-ps1syntaxin binding protein 3, pseudogene 14111049442111054421Rat
7553872LOC102556495uncharacterized LOC1025564954104131807104134481Rat
7706369Hdac2-ps1histone deacetylase 2, pseudogene 14102624284102625962Rat
7708743LOC102556090uncharacterized LOC1025560904111069839111075961Rat
7688358LOC102556035uncharacterized LOC1025560354110915998110999186Rat
7711844LOC102547728uncharacterized LOC1025477284115172801115177968Rat
7667063LOC102554372uncharacterized LOC1025543724119012925119030617Rat
7699711LOC102549526uncharacterized LOC1025495264104672363104687654Rat
7727476LOC102549052low molecular weight phosphotyrosine protein phosphatase-like4103247606103251384Rat
9102747Igkvl-ps16immunoglobulin kappa variable like, pseudogene 1649734899497349801Rat
9142253Ybx1-ps2Y box binding protein 1, pseudogene 24118133614118134832Rat
9124640LOC10369217960S ribosomal protein L34 pseudogene4120362254120362604Rat
9252629Igkvl-ps12immunoglobulin kappa variable like, pseudogene 124101726300101727506Rat
9330732Ndufb3l1NADH:ubiquinone oxidoreductase subunit B3 like 149782873997829070Rat
9389444Vax2lventral anterior homeobox 2 like4116178416116195253Rat
9438141Igkvl8immunoglobulin kappa variable like 849711573297119085Rat
9439280Igkvl9immunoglobulin kappa variable like 949757291097573408Rat
11355186LOC108350864ATP synthase subunit g, mitochondrial pseudogene4104555149104555540Rat
11051993Igkvl-ps11immunoglobulin kappa variable like, pseudogene 1149858862498589555Rat
11468430Trnas-gcu6transfer RNA serine (anticodon GCU) 64106831010106831091Rat
11472949LOC108350866uncharacterized LOC1083508664105957318105981816Rat
11458713Igkvl-ps2immunoglobulin kappa variable like, pseudogene 24100774851100775585Rat
11437638LOC10835072260S ribosomal protein L27 pseudogene4116278373116281125Rat
11051991Igkvl-ps10immunoglobulin kappa variable like, pseudogene 1049976417199765272Rat
11051998Igkvl-ps18immunoglobulin kappa variable like, pseudogene 184101003409101004411Rat
11362919Igkvl-ps13immunoglobulin kappa variable like, pseudogene 1349696857496969477Rat
11364654Igkvl-ps17immunoglobulin kappa variable like, pseudogene 1749749492997495415Rat
11051987Igkvl-ps20immunoglobulin kappa variable like, pseudogene 204101195589101196676Rat
11051990Igkvl-ps1immunoglobulin kappa variable like, pseudogene 14100900754100901355Rat
11052016Igkvl10immunoglobulin kappa variable like 1049791651997917533Rat
11052049Igkv8-30l1immunoglobulin kappa chain variable 8-30 like 14101838285101839132Rat
11421296LOC10835086960S ribosomal protein L31 pseudogene4116921291116921723Rat
11385872LOC108350868glyceraldehyde-3-phosphate dehydrogenase pseudogene4110616441110617544Rat
11402703Rpl27a-ps5ribosomal protein L27a, pseudogene 54108745019108755613Rat
11383082Igkvl-ps19immunoglobulin kappa variable like, pseudogene 194100736032100736741Rat
11502286LOC108350725uncharacterized LOC1083507254118778620118792730Rat
11508600Trnag-ccc4transfer RNA glycine (anticodon CCC) 44118852419118852489Rat
11497379Igkvl4immunoglobulin kappa variable like 44101645320101645700Rat
11518313LOC108350719uncharacterized LOC1083507194115639631115642945Rat
11488278LOC108350721uncharacterized LOC1083507214116211039116218830Rat
41321497LOC120102565U6 spliceosomal RNA4109168372109168478Rat
41353377LOC120102733small nucleolar RNA SNORA1749823881598238917Rat
41166952LOC120102316uncharacterized LOC1201023164115098139115106023Rat
41282493LOC120102708small nucleolar RNA SNORA174117652870117652993Rat
41323307LOC120102777U4 spliceosomal RNA4105038037105038123Rat
41323577LOC120102314uncharacterized LOC1201023144111407391111454991Rat
41112623LOC120102736small nucleolar RNA SNORA1749717502897175121Rat
41113583LOC120102728small nucleolar RNA SNORA1749681038496810504Rat
41169229LOC120102722small nucleolar RNA SNORA1749826317398263300Rat
41205249Rnu6-936RNA, U6 small nuclear 93649920039799200501Rat
41277236LOC120102585U6 spliceosomal RNA49914578099145884Rat
41381944LOC120102305uncharacterized LOC1201023054101437202101439905Rat
41114178LOC120102583U6 spliceosomal RNA49926872299268826Rat
41141586LOC120102311uncharacterized LOC1201023114105288960105294181Rat
41170451LOC120102696small nucleolar RNA SNORA1749713082197130958Rat
41251011LOC120102700small nucleolar RNA SNORA1749709688597097017Rat
41358316LOC120102632small nucleolar RNA SNORA36 family4104895641104895763Rat
41172269LOC120102644U11 spliceosomal RNA4110662076110662209Rat
41253364LOC120102725small nucleolar RNA SNORA1749858397298584104Rat
41327009LOC120102729small nucleolar RNA SNORA1749800423498004360Rat
41359859LOC120102324uncharacterized LOC1201023244117723370117725707Rat
41091703Fbl-ps4fibrillarin, pseudogene 44101416548101417555Rat
41116383LOC120102170thymosin beta-10-like4104962822104963289Rat
41388537LOC120102326uncharacterized LOC1201023264118416642118424029Rat
41389009LOC120102554U4 spliceosomal RNA4105248170105248327Rat
41362761Igkvl-ps8immunoglobulin kappa variable like, pseudogene 849953181099532249Rat
41094682LOC120102721small nucleolar RNA SNORA1749813375998133886Rat
41120297LOC120102574U6 spliceosomal RNA4102735624102735728Rat
41120707LOC120102598U6 spliceosomal RNA49921932699219429Rat
41176189LOC120102561U6 spliceosomal RNA4104156903104157009Rat
41364677LOC120102648small nucleolar RNA SNORA484102978143102978286Rat
41365694Igkvl-ps7immunoglobulin kappa variable like, pseudogene 749896141998965084Rat
41096961LOC120102643small nucleolar RNA SNORA514111475412111475543Rat
41121066Fam50a-ps1family with sequence similarity 50, member A, pseudogene 14106608389106609566Rat
41150042LOC120102331uncharacterized LOC1201023314120353804120366389Rat
41150073LOC120102639small nucleolar RNA SNORA2/SNORA34 family4118815877118816012Rat
41263518Igkvl-ps5immunoglobulin kappa variable like, pseudogene 549887513898875778Rat
41213638LOC120102652small nucleolar RNA SNORA484102675250102675393Rat
41156854Snord94small nucleolar RNA, C/D box 944103924328103924464Rat
41180823LOC120102592U6 spliceosomal RNA49916978599169889Rat
41215295LOC120102732small nucleolar RNA SNORA1749715488097155000Rat
41125163LOC120102717small nucleolar RNA SNORA1749849391198494037Rat
41103026Atp5mg-ps11ATP synthase membrane subunit g, pseudogene 114108818020108821027Rat
41159196LOC120102709small nucleolar RNA SNORA174111773083111773205Rat
41195793LOC120102315uncharacterized LOC1201023154113504541113533897Rat
41270105LOC120102319uncharacterized LOC1201023194115515273115521277Rat
41270403Igkvl-ps4immunoglobulin kappa variable like, pseudogene 449936335399363814Rat
41291582Npm1-ps6nucleophosmin 1, pseudogene 64108791940108792947Rat
41291607LOC120102330uncharacterized LOC1201023304120086931120112957Rat
41373605LOC120102663small nucleolar RNA SNORA174106494538106494669Rat
41129602LOC120102669small nucleolar RNA SNORA174117587214117587345Rat
41161074LOC120102320uncharacterized LOC1201023204116014672116016904Rat
41349825Rpl23-ps8ribosomal protein L23,pseudogene 84115616374115621512Rat
41374913LOC120102638small nucleolar RNA SNORA2/SNORA34 family4119234751119234887Rat
41162732LOC120102317uncharacterized LOC1201023174115217376115228513Rat
41083750LOC120102310uncharacterized LOC1201023104104988896104994531Rat
41107864LOC120102589U6 spliceosomal RNA49929007299290176Rat
41107960LOC120102702small nucleolar RNA SNORA1749700031297000443Rat
41200685LOC120102325uncharacterized LOC1201023254118176974118190926Rat
41109258Trnap-agg74transfer RNA proline (anticodon AGG) 744104598962104599042Rat
41233693LOC120102633small nucleolar RNA SNORA54116471399116471527Rat
40946187Igkvl-ps3immunoglobulin kappa variable like, pseudogene 349934046699340968Rat
40972357LOC120102677small nucleolar RNA SNORA174114390354114390483Rat
40974521LOC120102579U6 spliceosomal RNA49925367099253774Rat
41340927LOC120102746small nucleolar RNA U134117499018117499122Rat
40952747Trnas-aga32transfer RNA serine (anticodon AGA) 324103396425103396498Rat
40952956Arpc5l-ps4actin related protein 2/3 complex, subunit 5-like, pseudogene 449942323999424376Rat
40977765LOC120102731small nucleolar RNA SNORA1749748051797480618Rat
40955934LOC120102329uncharacterized LOC1201023294119717819119729211Rat
40933947LOC120102313uncharacterized LOC1201023134108573617108627858Rat
40934091Trnaa-agctransfer RNA alanine (anticodon AGC)4103258388103258469Rat
40961802LOC120102590U6 spliceosomal RNA49934623299346336Rat
40936449LOC120102716small nucleolar RNA SNORA1749757666097576791Rat
41008980LOC120102656small nucleolar RNA SNORA484102572182102572325Rat
41009709LOC120102711small nucleolar RNA SNORA174117685079117685209Rat
40942068LOC120102704small nucleolar RNA SNORA1749722965597229787Rat
41075263Igkvl-ps6immunoglobulin kappa variable like, pseudogene 649901452399015161Rat
41049106Igkvl-ps15immunoglobulin kappa variable like, pseudogene 1549932280799323306Rat
41316092LOC120102682small nucleolar RNA SNORA1749685191196852043Rat
41080233Gapdh-ps70Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 704116161930116162927Rat
41247803LOC120102720small nucleolar RNA SNORA174108118729108118852Rat
41136119LOC120102301uncharacterized LOC1201023014100744447100787990Rat
41152181LOC120102169uncharacterized LOC1201021694104098343104105838Rat
41152310LOC120102555U4 spliceosomal RNA4116423166116423314Rat
41257949LOC120102328uncharacterized LOC1201023284119415816119417839Rat
41033320LOC120102595U6 spliceosomal RNA49930944099309544Rat
41059548LOC120102691small nucleolar RNA SNORA1749698993796990067Rat
41337280LOC120102727small nucleolar RNA SNORA1749688594096886060Rat
41062867LOC120102308uncharacterized LOC1201023084104292221104321842Rat
41016841LOC120102668U1 spliceosomal RNA4111394809111394970Rat
41236250LOC120102679U1 spliceosomal RNA4103011258103011413Rat
41018082LOC120102321uncharacterized LOC1201023214116080648116105711Rat
41305950LOC120102564U6 spliceosomal RNA4101286236101286342Rat
41045910LOC120102715small nucleolar RNA SNORA1749796989597970021Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)460220938105220938Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)460220938105220938Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)460928534105928534Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462879517107879517Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in mean arterial blood pressure (CMO:0002035)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in systolic blood pressure (CMO:0000747)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in pulse pressure (CMO:0001882)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)462933508114921294Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)470808386115808386Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631662Hcar2Hepatocarcinoma resistance QTL 23.10.0003liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)478878504123878504Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
61364Iddm2Insulin dependent diabetes mellitus QTL 2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)478885890102684881Rat
738015Pia9Pristane induced arthritis QTL 94.50.048joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)480694870125694870Rat
2306899Bp338Blood pressure QTL 3380.071arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)481006124120102625Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)481192555126192555Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
634334Xhs3X-ray hypersensitivity QTL 310intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)484728680129854654Rat
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61476Aia3Adjuvant induced arthritis QTL 33.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)486730991131730991Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
2317587Eae26Experimental allergic encephalomyelitis QTL 26nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)488656681103194984Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
8662350Eae35Experimental allergic encephalomyelitis QTL 356.2blood tumor necrosis factor amount (VT:0008552)inflammatory exudate tumor necrosis factor level (CMO:0001435)4100834579103761084Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
2317588Eae27Experimental allergic encephalomyelitis QTL 27nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)4103194805112478794Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
12798527Anxrr58Anxiety related response QTL 584.110.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4119463257147278687Rat
70201Gcr1Gastric cancer resistance QTL 12.7stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)4120260281147278687Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 171334 UniSTS
  29448 UniSTS
UniSTS 144311 UniSTS