RH126157 Marker Search Result - Rat Genome Database

Symbol:

RH126157

Previously known as:

Xbp1; D11Ertd39e;

RGD ID:

4955689

Expected Size:

242 (bp)

Position

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	5,525,562 - 5,525,803	UniSTS	GRCm38
MGSCv37	11	5,425,565 - 5,425,806	UniSTS	GRCm37
Celera	11	6,018,556 - 6,018,796	UniSTS
Cytogenetic Map	11	A1	UniSTS
cM Map	11	3.0	UniSTS
Whitehead/MRC_RH	11	28.09	UniSTS

Is Marker For:

Genes: Xbp1

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	AGCATTTACATAGTAAATTTTCATCAT
Reverse Primer	AGAAACTTCTGACCCTCTTG

Region

Nucleotide Sequences


RefSeq Transcripts	NM_001271730.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_013842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB036745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF027963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF443192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL662876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC008153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC029197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	C77390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL589874.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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