AU040300 Marker Search Result - Rat Genome Database

Symbol:

AU040300

Previously known as:

402366;

RGD ID:

4931610

Expected Size:

147 (bp)

Position

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	2	104,999,820 - 105,001,334	UniSTS	GRCm38
GRCm38	1	21,512,032 - 21,512,178	UniSTS	GRCm38
MGSCv37	2	104,839,977 - 104,841,491	UniSTS	GRCm37
MGSCv37	1	21,502,113 - 21,502,259	UniSTS	GRCm37
Celera	1	21,397,527 - 21,397,673	UniSTS
Celera	2	106,233,008 - 106,234,514	UniSTS
Cytogenetic Map	1	A4	UniSTS
Cytogenetic Map	1	A5	UniSTS
Cytogenetic Map	2	E2	UniSTS
cM Map	2	57.91	UniSTS
Whitehead/MRC_RH	1	400.37	UniSTS

Is Marker For:

Genes: Kcnq5 Gm7658 Eif3m

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


RefSeq Transcripts	NM_145380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC115920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC131088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL606494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AU040300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC005598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC050191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC089568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC103795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC116787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC116789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL589448.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL592675.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KB727491.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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