Cldn5 Marker Search Result - Rat Genome Database

Symbol:

Cldn5

Previously known as:

UniSTS:265696; UniSTS:465379;

RGD ID:

4892931

Expected Size:

640 (bp)

Position

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	18,776,996 - 18,777,635	UniSTS	GRCm38
MGSCv37	16	18,777,089 - 18,777,728	UniSTS	GRCm37
Celera	16	19,351,050 - 19,351,689	UniSTS
Cytogenetic Map	16	A3	UniSTS
cM Map	16	11.65	UniSTS
cM Map	16	11.65	UniSTS

Is Marker For:

Genes: Cldn5

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


RefSeq Transcripts	NM_013805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC010001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC083895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC113264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC133573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC134383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC134384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF035814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF087823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY405449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC002016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL593720.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH584307.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U82758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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