D13Rat171 Marker Search Result - Rat Genome Database

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Marker: D13Rat171

Symbol: D13Rat171
Previously known as: R0331-C12; oxsts9466; 
RGD ID: 42982
Expected Size: 207 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Celera1330,124,798 - 30,125,004UniSTS
SHRSP x BN Map132.33UniSTS
SHRSP x BN Map132.33RGD


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGCAAACCAATTACCCAAAA
Reverse Primer TCAGTCACATCCTGTCCCTTC
 
Template 
ACCAGCTGTGTAAACTGGTATGTGTGGTTGTGCACAGCTGTAATCCCAGCACTCTGGGGGTGAA
GGCAGGAGGGTCAGGAGGGCAAGAGGTCACATATTCATCTGTCTAGAAAGTTTGAAGCCAGTGG
GTAACAGCCTTTGCTGTGGGAGCCTGATAGCCAGAGTGTGGTCCTGGGAGCCATGTTTGAAAAG
GGGGGGTGATGGAGCAATGTCTGTAATTCTAGCACGCCAGTGANAAGATGGGCAGACGGAGAGA
GAGAACTGGAAAGAAGCTCAAGGGNTACCCAGGGTAGAGTGTGAAGTTCAGAATGAGAGACCCT
GCCTAAATCAGGCAAGGCACAAGGCAAACCAATTACCCAAAAGGCTGTCCTCTGACCTACACAC
ACACACACACACACACACACACACACACACACACACACACACACAATGAGTTAATTGGTTGATG
AAGTTTAATGATGAAGACATTGTCTACTGAGTCGGTGGNTTCCTACAGTAGGCACATCCCTTTA
TCCTCTCTACTCTACTGAAGGGACAGGATGTGACTGATCTGGTTTTAAAAGACATCAGAGGGGG
TANGAGCTCGAATTCGTAATCATGGTCATAGNTGTTTCCTGTGTGAAATTGTTATCCGCTCACA
ATTCCACACAACATACGAGCCGGAGCATAAGTGTAAGCCTGGGGTGCTATGAGTGAGCTAACTC
ACATTAATTGGTTGCGCCANTGCCCGCTTTCCAGTCNGAACTGTCGTGCAGTGCTTATGATCGG
CNCGCGCGGGNGAGGGTTTGGTNTGGCGCAGGTGGTTNTCTTTCACAGTGAGNGGCA

Region

Nucleotide Sequences
GenBank Nucleotide CH474028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
UniSTS 226546 UniSTS