D2Rat339 Marker Search Result - Rat Genome Database

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Marker: D2Rat339

Symbol: D2Rat339
Previously known as: R0343-D09; oxsts10599; 
RGD ID: 42596
Expected Size: 143 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02119,343,311 - 119,343,459NCBIRnor6.0
Rnor_6.02119,345,196 - 119,345,350NCBIRnor6.0
SHRSP x BN Map243.3098RGD
SHRSP x BN Map243.3098UniSTS
Is Marker For: QTLs:   Alcrsp23  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGTATATGCATAAATGGGGCAA
Reverse Primer TGTCTTCTCAAAAATAGGCAAGG
 
Template
AGGTCAGATCTAGAGGATCCCCACCTGTATGTGAGCATATGCGTGCTCATGCTTGTGTGTATAT
GCATAAATGGGGCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCACAGTTTTTGG
AATTCAGCTTAAAAAATGCCCAGAATGTGGAGGTGGAAATGAAAATAAACCTTGCCTATTTTTG
AGAAGACAAATCATTTGATAATACTCAGTCTTTTCAATAGTAACCAGTTATTCAAAATAGCCTC
TGCAAACATATATAATTATGTATGCAGGATGGACAAAGAACATGAAAAAGTTACTAATTAGTGT
GGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT
CACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTG
AGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCC
AGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGG
TTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCTGGCCCGAGAGAGTT
GCGCAAGCGGTCCACGCTGGTTTGCCCCAGCGGCGAAAATCTGTTTGATGGTGGTTCGAATCGG
CANTCCTAAAATCNAAGATAGCCGGAAGGGTGATGTTGTTCATTTGGACAGGTCCTATNANCGG
GATCNGTCNAGGNNNACGTTTNGGG

Region

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
NCBI Gene 100423059 UniSTS
UniSTS 227473 UniSTS