D2Rat290 Marker Search Result - Rat Genome Database

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Marker: D2Rat290

Symbol: D2Rat290
Previously known as: R0290-B02; oxsts10550; 
RGD ID: 41676
Expected Size: 249 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map21484.4RGD
RH 3.4 Map21484.4UniSTS
SHRSP x BN Map281.8498UniSTS
SHRSP x BN Map281.8498RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CATTAATATACTCCGAGCACGTG
Reverse Primer GGGAATAGTTGGTAAGAATTAGGTG
 
Template 
TCCTGNAGGTCGATCTAGAGGATCCCCACATTAATATACTCCGAGCACGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTAACAGTTTGGTAAAGTTCCAAAGCTGACTTTATAAGCAAT
ACATGTTTTCCAATGTGAATATTTTAGTGTTTTGTTTCTCTATGTCCAATATTGGGATTCTAAA
ATAATGGTTGTTGCTTTGGTTTCCAAAAAACAAAGGAAAATCATTTCTTTTTCTTAAAGTCACC
TAATTCTTACCAACTATTCCCTAAAATGATAGTCCTTAGTGGGTACCGAGTCTTCGAATTTCGT
AATTCATGGTTCATAGTCTGTTTTCCTGTGTGAAATTGTTATTCCGCTTCACAATTTCCACACA
ATCATATCGAGTCCGGTAAGTCATAAAGTGTAAAGTCCTGGGGTGTCCTAATGAGTGAGCTAAC
TTCACATTAATTGTCGTTGCGCNCACTGTCCCGCTTTACCAGTCGGGAAACCTGTCGTGTCCAG
CTGTCATTAATGAATCGGCCAACGNGTCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGG
TTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAG
TTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCG
AAATCGGCAAAANCCCTTATAAATCAAAAGAATAGCCCGAGATAGGGTTGAGTGTTGTTCCAGT
TTGGAACAGAGTCCACNATTAAAGAACGTGGACTCCAACGTCAAAGGGCGAAAACCGTCTATAG
GGCGTGGCACTACGTGAACATCANNNATCAAGTTTTTGGGGTGAGGGC

Region

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
UniSTS 121695 UniSTS