D7Rat179 Marker Search Result - Rat Genome Database

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Pathways
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Marker: D7Rat179

Symbol: D7Rat179
Previously known as: R0256-A04; oxsts11390; 
RGD ID: 40598
Expected Size: 165 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0748,211,178 - 48,211,333NCBIRnor5.0
RGSC_v3.4744,776,715 - 44,776,869RGDRGSC3.4
RGSC_v3.1744,796,986 - 44,797,140RGD
FHH x ACI Map724.55RGD
FHH x ACI Map724.55UniSTS
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTCCACAGCAGCCATGTAAG
Reverse Primer AACCCAAACTTTGTCCCACTT
 
Template 
ATCCCCACACCACCCCTTCCACAGCAGCCATGTAAGGACTCTAACACACACACACACACACACA
CAGACACACACACACACACACACACATAACGGAATTTTAAGTACATAAGTAATTTACATACCCG
GACAATAAATAAATACTTAAATAAAAGATAGTAAGTGGGACAAAGTTTGGGTTACCCTGTGATA
GAAATATAAGGTACCACAGTACTTAACCGTAAGGACTAGTTACTTAANTACNCNAAGACNATAA
GACAGGACACGAATAAGACAAATATGNTGAATACACAAGTGGGTCACCGAAGACTACGAATTAC
GTAATACATGGTACATAGNTGTTTACCTGTGTGAAATTGTTATACGACNCACAATTCCACACAA
CATAANGAGACCGGAAGCATAAAGTGTAAAGNCTGGGGTGCTAATGAGTGAGNTAANTACACAT
TAATTGNGTTGNGCNCATGACCCGNTTTCCAGTNGGGAAACTGTNGTGNCCAGNTGACATTNTG
AATCGGCCAANGNGNGGGGAGAGGNGGTTTGNGTATTGGGNGCCAGGGTGGTTTTTNTTTTNAA
CGTGANNGGGGCANANNNNTTNNCCTTCANNNCTGNC

Region

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
UniSTS 228128 UniSTS