D3Rat169 Marker Search Result - Rat Genome Database

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Marker: D3Rat169

Symbol: D3Rat169
Previously known as: R0089-C10; oxsts10711; 
RGD ID: 39408
Expected Size: 245 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
SHRSP x BN Map347.2698UniSTS
SHRSP x BN Map347.2698RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   SS/Jr   COP/OlaHsd  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGCTACCAGTGCGATAAACC
Reverse Primer GGCCGCACTTGTAACCTC
 
Template 
GACNNAGAGGATCCCCCNGATGTGGGGGCCGCACTTGTAACCTCANTGATANGGAGGANAAAAN
GACAGACATTGGTTAGTCAACCTACCTCAGGCTGAGANGCCTTATCTCGAAAAAAAAAAAAAAG
TAAATTTATNAGTANGACCTNGGAGTGGTGCCATTCTCCACACACATNGTTACAAATGAACCGC
ACTGGCAAACACACGCACGCGCACACACACACACACACACACACACACGGNGANGGGTAGGTTT
ATCGCACTGGTAGCCTTCTTAAGANGCTGAGAGGGGTACCGAGCGGCGGATTCNTAATCGTGNT
CATAGCTNTTTCCTGTGTGAAATTGTNNTCCGCTCGGCNGTTCCGCACGGCATAGGGGCCGGGG
GCANAAGGTGTANAGCCTGGGGTGCCTAATNGGGNGGCTAACTCACATTAATTGCGTGGCGCTC
AGGGCCCGCTGNNCAGTCGGGGGNACCTNTCGNGNNGGCTNNNNTANTNNAGNGGNNNNGGGNG
GGGGGNGGGCGNNTTCNNGGGGGNCCGGGTGGTNTNNTTTNGNGGGGGNGGGGNGGTNNNGNGC
TTNGCGCTTGCCCNGGGGGTTNNNGNG

Region

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
NCBI Gene 444910 UniSTS
UniSTS 227569 UniSTS