D9Rat103 Marker Search Result - Rat Genome Database
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Pathways
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Marker: D9Rat103

Symbol: D9Rat103
Also known as: R0074-C06; oxsts7491; 
RGD ID: 38536
Expected Size: 208 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.09116,140,301 - 116,140,502NCBIRnor6.0
Rnor_5.09115,629,810 - 115,630,011UniSTSRnor5.0
RGSC_v3.49107,079,208 - 107,079,410RGDRGSC3.4
RGSC_v3.49107,079,209 - 107,079,410UniSTSRGSC3.4
RGSC_v3.19107,288,688 - 107,288,890RGD
Celera9105,074,876 - 105,075,077UniSTS
Cytogenetic Map9q37UniSTS
FHH x ACI Map985.77UniSTS
FHH x ACI Map985.77RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
QTLs:   Swd1  
Genes:   Arhgap28  


Annotation



Strains and Sequence

Sequence
 
Forward Primer CACACGCATACAAATATCTACTCA
Reverse Primer ATGCCTCAGCCTTCTGATTG
 
Template 
TGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCCCTAGAATCCTAGATGCCTCAG
CCTTCTGATTGTGGAAATTATAAACATGCTCCACCAGGTCCAGCATAGGAGGTTTAAAAGATTT
TAGTTTACATTGTTATGGCTGTTTCTGTCATTTCTGTATTTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGCTTGTGTATATGAGTAGATATTTGTAT
GCGTGTGTCTATACATATACATGTGTGTACATGTAGAGGGGGTACCGAGCTCGAATTCGTAATC
ATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCC
GGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGC
GCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACG
CGCGGGGAGAGGCGGTNTGCGTATTGGGCGCCAGGTGGTTTCTNNCACATGAGANNCACAGTGA
TGCCTCACGCTGCCTGAAAGTCACANGGTCACTGTNGNCACAGGANACTGTTGANGNGNCGAAC
NGAATCCTNTAACAAATACCGNAANNGATTG

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1559882Arhgap28Rho GTPase activating protein 289116057229116222440Rat

Nucleotide Sequences
GenBank Nucleotide CH474043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)929075079122095297Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)981411073119983851Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)990024661119983851Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 301709 UniSTS
  544538 UniSTS
UniSTS 228317 UniSTS