D8Rat1 Marker Search Result - Rat Genome Database

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Marker: D8Rat1

Symbol: D8Rat1
Previously known as: R0007-C11; oxsts7405; R007-C11; 
RGD ID: 35226
Expected Size: 240 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.08126,738,232 - 126,738,579NCBIRnor5.0
RGSC_v3.48123,784,235 - 123,784,581RGDRGSC3.4
RGSC_v3.18123,803,972 - 123,804,318RGD
RH 3.4 Map81306.3UniSTS
RH 3.4 Map81306.3RGD
RH 2.0 Map81025.2RGD
SHRSP x BN Map881.89RGD


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines
6. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
7. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8

Strains and Sequence

Sequence
 
Forward Primer TCCCTTAAGTTGGCCTCTGA
Reverse Primer CCTTGTGTGTGTGTGACCTTG
 
Template 
CCATGCAAGCTTGCTGCCTGCAGGTCGACTCTAGAGGATCCCCACTTGCCACAAAGCCTGACCT
GAGTTCAGTCCCTAGGACCCACATGGTGGAAGGAGAGAGCTGACTCCCTTAAGTTGGCCTCTGA
CCACGGTCCCTGTGCATGCTCCTACAGGCCTGCACACACACACACACACACACACACACACACA
CACACACAGAGACACACACACACACAGAGACACACACACAAGACACACACACAAGACACACACA
CACAAGCACACAAACACATATACACACACACATCATGACACACAAGGCACACACACATACACAT
ACACACACAAACACACACATACAAGGTCACACACACACAAGGTGCACACACACACAAATCACAC
ACACACATACACACACAAGGTACTTCTANNGATTTATCAAAATTTGATGTGCCGAATTCTGAGT
AACATGGTGNATTCGGTTT

Region

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
UniSTS 119074 UniSTS