TPM1 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: TPM1

Symbol: TPM1
Previously known as:
RGD ID: 2190787
Expected Size: 0 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371563,349,222 - 63,349,310UniSTSGRCh37
Build 361561,136,275 - 61,136,363RGDNCBI36
Celera1540,228,927 - 40,229,015RGD
Is Marker For: Genes:   TPM1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCTGGTTGAGGAAGAGTTGG
Reverse Primer CTCATTTGCTGCCTTCTCG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NW_925884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC079328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF474156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK092051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK092573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY640414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY640415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV177389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ424903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G27127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU324935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M19267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M19713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M19714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M19715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X12369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z24727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 7168 UniSTS
UniSTS TPM1 UniSTS SSLP Pipeline