WIAF-2084 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: WIAF-2084

Symbol: WIAF-2084
Previously known as: stSG8032; WIAF-2084-STS; 
RGD ID: 2187237
Expected Size: 121 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37868,125,593 - 68,125,713UniSTSGRCh37
Build 36868,288,147 - 68,288,267RGDNCBI36
Celera864,118,993 - 64,119,113RGD
Cytogenetic Map8q13UniSTS
HuRef863,617,522 - 63,617,642UniSTS
GeneMap99-GB4 RH Map8358.28UniSTS
Is Marker For: Genes:   ARFGEF1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGATTGTTAGGGATAAGTGGGC
Reverse Primer TTTTACCAACCCCAGCTGTC
 

Region

Nucleotide Sequences
GenBank Nucleotide AC021321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC087359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001616.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G43369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G59907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL294453.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976341.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 10565 UniSTS
UniSTS WIAF-2084 UniSTS SSLP Pipeline