G17258 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: G17258

Symbol: G17258
Previously known as: SHGC-6702; 
RGD ID: 2186333
Expected Size: 275 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh378131,069,271 - 131,069,545UniSTSGRCh37
Build 368131,138,453 - 131,138,727RGDNCBI36
Celera8127,249,244 - 127,249,518RGD
Cytogenetic Map8q24.1-q24.2UniSTS
HuRef8126,389,920 - 126,390,194UniSTS
Is Marker For: Genes:   ASAP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGAGCTGCAGGTTTTAATGT
Reverse Primer AGCCAGTAAGCAGGCTAAGT
 

Region

Nucleotide Sequences
GenBank Nucleotide AC103725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP005857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001616.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G17258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297992.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976342.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 50807 UniSTS
UniSTS G17258 UniSTS SSLP Pipeline