RH44550 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH44550

Symbol: RH44550
Previously known as: stSG8214; 
RGD ID: 2185715
Expected Size: 146 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371496,176,472 - 96,176,617UniSTSGRCh37
Build 361495,246,225 - 95,246,370RGDNCBI36
Celera1476,232,221 - 76,232,366RGD
Cytogenetic Map14q32.1UniSTS
HuRef1476,362,044 - 76,362,189UniSTS
GeneMap99-GB4 RH Map14261.84UniSTS
NCBI RH Map141023.5UniSTS
Is Marker For: Genes:   TCL1A  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGACCATCTATAAAAGGGGGG
Reverse Primer TCAGAAGCCTCTGGGTCAGT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001098725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL139020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001622.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL294504.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976384.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 8115 UniSTS
UniSTS RH44550 UniSTS SSLP Pipeline