WI-17002 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: WI-17002

Symbol: WI-17002
Previously known as: EST170638; 
RGD ID: 2183210
Expected Size: 111 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371913,010,639 - 13,010,748UniSTSGRCh37
Build 361912,871,639 - 12,871,748RGDNCBI36
Celera1912,900,347 - 12,900,456RGD
Cytogenetic Map19p13.2UniSTS
HuRef1912,582,506 - 12,582,615UniSTS
GeneMap99-GB4 RH Map1973.08UniSTS
Whitehead-RH Map1962.9UniSTS
NCBI RH Map1987.9UniSTS
Is Marker For: Genes:   GCDH   SYCE2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCTGCTCCAACACCCAGC
Reverse Primer ACATGGAAGCAACTCCGTCT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AD000092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK098370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001627.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G15299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G22245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL305205.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583485.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976403.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  R00483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U69141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 256126 UniSTS
  2639 UniSTS
UniSTS WI-17002 UniSTS SSLP Pipeline