HUM000S655 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: HUM000S655

Symbol: HUM000S655
Previously known as: SHGC-2457; GDB:214131; GDB:223569; 
RGD ID: 2181807
Expected Size: 166 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371741,843,650 - 41,843,697UniSTSGRCh37
Build 361739,199,176 - 39,199,223RGDNCBI36
Celera1738,551,657 - 38,551,704RGD
Cytogenetic Map17q21UniSTS
HuRef1737,607,748 - 37,607,795UniSTS
Stanford-G3 RH Map171813.0UniSTS
GeneMap99-G3 RH Map172314.0UniSTS
Is Marker For: Genes:   DUSP3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCGTTGGAAGCTTAACTTTTGTTG
Reverse Primer CTAAAATTTGGTGGCGTTAAGAGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_004090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC003098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC055813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF326736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV180496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001625.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D12324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G21249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL293719.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976397.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 1845 UniSTS
UniSTS HUM000S655 UniSTS SSLP Pipeline