RH47350 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH47350

Symbol: RH47350
Previously known as: stSG27078; 
RGD ID: 2179443
Expected Size: 122 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X15,844,038 - 15,844,159UniSTSGRCh37
Build 36X15,753,959 - 15,754,080RGDNCBI36
CeleraX19,961,520 - 19,961,641RGD
Cytogenetic MapXp22.2UniSTS
HuRefX13,597,690 - 13,597,811UniSTS
GeneMap99-GB4 RH MapX88.99UniSTS
NCBI RH MapX10.0UniSTS
Is Marker For: Genes:   AP1S2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCCACCATGTATCTTGTGTGTG
Reverse Primer GTGTCAAACTATGCAGAGCTGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001272071.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC004106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF251295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL312255.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976423.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 8905 UniSTS
UniSTS RH47350 UniSTS SSLP Pipeline