SHGC-50337 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: SHGC-50337

Symbol: SHGC-50337
Previously known as:
RGD ID: 2178782
Expected Size: 281 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh374155,506,465 - 155,506,745UniSTSGRCh37
Build 364155,725,915 - 155,726,195RGDNCBI36
Celera4152,837,431 - 152,837,711RGD
Cytogenetic Map4q28UniSTS
HuRef4151,247,046 - 151,247,326UniSTS
TNG Radiation Hybrid Map493131.0UniSTS
Is Marker For: Genes:   FGA  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCATGAAGGAACACATAGCACC
Reverse Primer CTCTGTACTGTTAGGCATTTGGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_021871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC107385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF361104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001612.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G33478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297995.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J00127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J00128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976326.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M64982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 2243 UniSTS
UniSTS SHGC-50337 UniSTS SSLP Pipeline