D5S1728 Marker Search Result - Rat Genome Database

Symbol:

D5S1728

Previously known as:

WI-4203; MR6613; GDB:458204;

RGD ID:

2176284

Expected Size:

178 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	45,466,562 - 45,466,739	UniSTS	GRCh37
Build 36	5	45,502,319 - 45,502,496	RGD	NCBI36
Celera	5	45,360,138 - 45,360,315	RGD
Cytogenetic Map	5	p12	UniSTS
HuRef	5	45,419,695 - 45,419,872	UniSTS
Whitehead-YAC Contig Map	5		UniSTS

Is Marker For:

Genes: HCN1

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	TCAAAATAAGATTAAGAAAATGGGC
Reverse Primer	TTTTTTAATTTTGTGTCAGGATGG

Region

Nucleotide Sequences


GenBank Nucleotide	AC117529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001613.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	G02887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL295717.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976327.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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