D1S1857E Marker Search Result - Rat Genome Database

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Marker: D1S1857E

Symbol: D1S1857E
Previously known as: Cda15b04; GDB:442575; GDB:448469; SHGC-74643; 
RGD ID: 2176157
Expected Size: 137 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37140,538,422 - 40,538,558UniSTSGRCh37
Build 36140,311,009 - 40,311,145RGDNCBI36
Celera138,820,709 - 38,820,845RGD
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map1p32UniSTS
HuRef138,656,473 - 38,656,609UniSTS
TNG Radiation Hybrid Map119346.0UniSTS
GeneMap99-GB4 RH Map1121.03UniSTS
Is Marker For: Genes:   PPT1   CAP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TATTTTCACATCCCCCCCAAC
Reverse Primer GACTACGCCTTGATGAAAGAAC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF022211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL512599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001609.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G22456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL300936.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976295.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L42809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U44772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 10487 UniSTS
  5538 UniSTS
UniSTS D1S1857E UniSTS SSLP Pipeline