SHGC-87658 Marker Search Result - Rat Genome Database

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Marker: SHGC-87658

Symbol: SHGC-87658
Previously known as: stSG40081; 
RGD ID: 2173414
Expected Size: 123 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372142,836,587 - 42,836,709UniSTSGRCh37
Build 362141,758,457 - 41,758,579RGDNCBI36
Celera2128,034,768 - 28,034,890RGD
Cytogenetic Map21q22.3UniSTS
HuRef2128,305,461 - 28,305,583UniSTS
TNG Radiation Hybrid Map2116387.0UniSTS
GeneMap99-GB4 RH Map21221.95UniSTS
Is Marker For: Genes:   TMPRSS2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TAGAGAGCAGCATTCCCAGG
Reverse Primer TAAGAAGGGGCAATAAAGAAGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001135099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF329454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK123948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL163285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL773571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BA000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001629.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL293792.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976414.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L35674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 7113 UniSTS
UniSTS SHGC-87658 UniSTS SSLP Pipeline