SHGC-35356 Marker Search Result - Rat Genome Database

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Marker: SHGC-35356

Symbol: SHGC-35356
Previously known as:
RGD ID: 2170373
Expected Size: 177 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371455,707,169 - 55,707,342UniSTSGRCh37
Build 361454,776,922 - 54,777,095RGDNCBI36
Celera1435,756,654 - 35,756,827RGD
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map14q22UniSTS
HuRef1435,869,781 - 35,869,954UniSTS
GeneMap99-G3 RH Map141828.0UniSTS
Is Marker For: Genes:   COX5A   COX5AP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TAAACCGCATGGATGGGC
Reverse Primer AGTTCAAACTCATTTCCCTTTTATT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_004255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK026615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK026623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL158801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001622.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G28336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976384.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M22760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 9377 UniSTS
  9385 UniSTS
UniSTS SHGC-35356 UniSTS SSLP Pipeline