SHGC-2485 Marker Search Result - Rat Genome Database

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Marker: SHGC-2485

Symbol: SHGC-2485
Previously known as: GDB:214210; GDB:223648; 
RGD ID: 2168941
Expected Size: 195 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371689,629,433 - 89,629,627UniSTSGRCh37
Build 361688,156,934 - 88,157,128RGDNCBI36
Celera1674,692,939 - 74,693,133RGD
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map16q24.3UniSTS
HuRef1675,324,535 - 75,324,729UniSTS
GeneMap99-G3 RH Map163933.0UniSTS
Is Marker For: Genes:   RPL13  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTTGAAAAGAAAAAATAAAGCCCTCC
Reverse Primer AACACAGAAAGTAAAGCATTATCCAG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB062392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC092123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK093246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK127579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001624.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976393.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X64707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 6137 UniSTS
UniSTS SHGC-2485 UniSTS SSLP Pipeline