SGC32140 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: SGC32140

Symbol: SGC32140
Previously known as: EST133611; 
RGD ID: 2160738
Expected Size: 150 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37532,791,672 - 32,791,819UniSTSGRCh37
Build 36532,827,429 - 32,827,576RGDNCBI36
Celera532,673,304 - 32,673,451RGD
Cytogenetic Map5p14-p13UniSTS
HuRef532,759,721 - 32,759,868UniSTS
Whitehead-RH Map5125.7UniSTS
NCBI RH Map5175.4UniSTS
Is Marker For: Genes:   NPR3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGGATGTATTTTTTAATGAGAACAC
Reverse Primer TATTTCTTGTGCGAACTGGTC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC026703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK024116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001613.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G25875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL296153.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976327.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T71254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 4883 UniSTS
UniSTS SGC32140 UniSTS SSLP Pipeline