RH12357 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH12357

Symbol: RH12357
Previously known as: stSG3509; A003V21; 
RGD ID: 2156961
Expected Size: 101 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373186,974,280 - 186,974,379UniSTSGRCh37
Build 363188,456,974 - 188,457,073RGDNCBI36
Celera3185,406,107 - 185,406,206RGD
Cytogenetic Map3q27-q28UniSTS
HuRef3184,378,752 - 184,378,851UniSTS
GeneMap99-GB4 RH Map3701.58UniSTS
Is Marker For: Genes:   MASP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGAATAGATCTAACTAAGATGGT
Reverse Primer GAACCTTCACCTTCTTCT
 

Region

Nucleotide Sequences
GenBank Nucleotide AB007617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D61695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL295286.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976318.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 5648 UniSTS
UniSTS RH12357 UniSTS SSLP Pipeline