RH46977 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH46977

Symbol: RH46977
Previously known as: stSG26021; WIAF-3809-STS; 
RGD ID: 2152372
Expected Size: 168 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37838,020,953 - 38,021,120UniSTSGRCh37
Build 36838,140,110 - 38,140,277RGDNCBI36
Celera836,973,489 - 36,973,656RGD
Cytogenetic Map8p11.2UniSTS
HuRef836,555,870 - 36,556,037UniSTS
GeneMap99-GB4 RH Map8145.14UniSTS
Is Marker For: Genes:   LSM1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCCACAGTGATGTGTGAAGG
Reverse Primer CCACCTCACGCATTTGATC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_014462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC084024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ238094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001616.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G44166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL294334.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976340.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 27257 UniSTS
UniSTS RH46977 UniSTS SSLP Pipeline