D16S3319 Marker Search Result - Rat Genome Database

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Marker: D16S3319

Symbol: D16S3319
Previously known as: SHGC-13798; GDB:736482; GDB:738138; 
RGD ID: 2150587
Expected Size: 149 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371666,438,482 - 66,438,630UniSTSGRCh37
Build 361664,995,983 - 64,996,131RGDNCBI36
Celera1650,944,380 - 50,944,528RGD
Cytogenetic Map16q22.1UniSTS
HuRef1652,314,449 - 52,314,597UniSTS
TNG Radiation Hybrid Map1628594.0UniSTS
Stanford-G3 RH Map162468.0UniSTS
GeneMap99-G3 RH Map162912.0UniSTS
Is Marker For: Genes:   CDH5  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCACCAGTTTGGCCAATATA
Reverse Primer GGGTTTTTGCATAATAAGCAGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC012325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001624.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G14841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL293797.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976392.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T53626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X79981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 1003 UniSTS
UniSTS D16S3319 UniSTS SSLP Pipeline