SHGC-87574 Marker Search Result - Rat Genome Database

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Marker: SHGC-87574

Symbol: SHGC-87574
Previously known as: stSG8980; 
RGD ID: 2134799
Expected Size: 162 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372134,931,912 - 34,932,073UniSTSGRCh37
GRCh371157,679,402 - 157,679,563UniSTSGRCh37
Build 361155,946,026 - 155,946,187RGDNCBI36
Celera2120,131,546 - 20,131,707UniSTS
Celera1130,750,583 - 130,750,744RGD
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map1q23.1UniSTS
HuRef1129,037,401 - 129,037,562UniSTS
HuRef2120,410,377 - 20,410,538UniSTS
TNG Radiation Hybrid Map2111642.0UniSTS
GeneMap99-GB4 RH Map21167.97UniSTS
NCBI RH Map21257.5UniSTS
Is Marker For: Genes:   SON   SONP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTCCACCAAAAAGCCAGGTA
Reverse Primer GCAAATTGCTGCTGAAAACA
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_032195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB028942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF139897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF380179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF380180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF380181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF380183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF380184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK091233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK127947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL356276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY026895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY419433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BA000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001609.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001629.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL294733.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297156.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976304.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976414.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X63071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X63753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X63754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X71604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 148300 UniSTS
  6651 UniSTS
UniSTS SHGC-87574 UniSTS SSLP Pipeline