DXS8149 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: DXS8149

Symbol: DXS8149
Previously known as: NIB2031; GDB:626360; 
RGD ID: 2130865
Expected Size: 113 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X103,046,863 - 103,046,975UniSTSGRCh37
Build 36X102,933,519 - 102,933,631RGDNCBI36
CeleraX103,485,873 - 103,485,985RGD
Cytogenetic MapXq22UniSTS
HuRefX92,702,924 - 92,703,036UniSTS
Whitehead-RH MapX271.5UniSTS
Is Marker For: Genes:   PLP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CCTTTTTCCTGGAAGCTTAC
Reverse Primer CTTGGTGTGTTAAGAGTTAGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001128834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AJ006976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK128782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC095452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486409.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS991047.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G38531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL301780.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976428.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M15032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M27110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M54927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z73964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 5354 UniSTS
UniSTS DXS8149 UniSTS SSLP Pipeline