SHGC-12566 Marker Search Result - Rat Genome Database

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Marker: SHGC-12566

Symbol: SHGC-12566
Previously known as: WI-7332; 
RGD ID: 2121053
Expected Size: 334 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37631,981,575 - 31,981,908UniSTSGRCh37
GRCh37631,948,837 - 31,949,170UniSTSGRCh37
Build 36632,056,816 - 32,057,149RGDNCBI36
Celera633,548,599 - 33,548,932RGD
Cytogenetic Map6p21.3UniSTS
HuRef631,735,846 - 31,736,180UniSTS
Stanford-G3 RH Map61662.0UniSTS
GeneMap99-G3 RH Map61794.0UniSTS
Is Marker For: Genes:   TNXA   C4A   STK19   C4B   C4B_2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CATCATTGCTCAGCTCCTCA
Reverse Primer AACCCTGCCCTCCTTCAC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_004197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_032454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC195777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC231393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC234577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC235032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC235561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC236024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC236027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC236393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC237284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC239673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF019413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL049547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL662849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX247883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX679671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX936373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001614.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR753845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR759782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL295308.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976331.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KE133704.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KE133705.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L26260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L26261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L26262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L26263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S38953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U24578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X77386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X77491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 100293534 UniSTS
  373159 UniSTS
  7146 UniSTS
  720 UniSTS
  721 UniSTS
  8859 UniSTS
UniSTS SHGC-12566 UniSTS SSLP Pipeline