STS-R00303 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: STS-R00303

Symbol: STS-R00303
Previously known as:
RGD ID: 2120414
Expected Size: 225 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371575,194,549 - 75,194,773UniSTSGRCh37
Build 361572,981,602 - 72,981,826RGDNCBI36
Celera1552,144,517 - 52,144,741RGD
Cytogenetic Map15q24.1UniSTS
HuRef1551,991,391 - 51,991,615UniSTS
GeneMap99-GB4 RH Map15260.63UniSTS
Is Marker For: Genes:   FAM219B  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CATAAAGTGCTATTTTCTGCCTCC
Reverse Primer CTGTAGTTTTCCTCTGCTGTTGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_020447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC125435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK001572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001623.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297281.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976389.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 57184 UniSTS
UniSTS STS-R00303 UniSTS SSLP Pipeline