D3S4492 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: D3S4492

Symbol: D3S4492
Previously known as: GDB:5183218; 
RGD ID: 2113212
Expected Size: 97 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37378,987,802 - 78,987,898UniSTSGRCh37
Build 36379,070,492 - 79,070,588RGDNCBI36
Celera375,861,503 - 75,861,599RGD
Celera379,731,724 - 79,731,820UniSTS
Cytogenetic Map3p12UniSTS
HuRef379,007,580 - 79,007,676UniSTS
Is Marker For: Genes:   ROBO1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CACCGAATGTTGCTGCCGAGT
Reverse Primer TTGCTACACAGACATAGACTCCTTC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001145845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_002941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC016946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC106718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF040990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC112336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC115020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC115021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC115022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC157861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC171855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH878421.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ030983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL305086.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976317.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z95705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 6091 UniSTS
UniSTS D3S4492 UniSTS SSLP Pipeline