D6S1276 Marker Search Result - Rat Genome Database

Symbol:

D6S1276

Previously known as:

GATA7F06; SHGC-17937; GDB:455947; G00-455-947; GATA-P32359; CHLC.GATA7F06; CHLC.GATA7F06.P32359;

RGD ID:

1851199

Expected Size:

195 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	55,715,057 - 55,715,251	UniSTS	GRCh37
Build 36	6	55,823,016 - 55,823,210	RGD	NCBI36
Celera	6	57,376,262 - 57,376,456	RGD
Cytogenetic Map	6	p12.1	UniSTS
HuRef	6	55,550,164 - 55,550,358	UniSTS
Marshfield Genetic Map	6	78.85	UniSTS
deCODE Assembly Map	6	78.99	UniSTS
Stanford-G3 RH Map	6	2913.0	UniSTS
Whitehead-RH Map	6	306.3	UniSTS
Whitehead-YAC Contig Map	6		UniSTS
NCBI RH Map	6	728.3	UniSTS

Is Marker For:

Genes: BMP5

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	ATCCTAGGTAGGGATCTATCTATCT
Reverse Primer	CTTAGACATGCCTGGCAAAT

Region

Nucleotide Sequences


GenBank Nucleotide	AL137178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001614.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	G10114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL299802.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976331.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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