ECD18560 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: ECD18560

Symbol: ECD18560
Previously known as:
RGD ID: 1834824
Expected Size: 356 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X154,256,264 - 154,256,590UniSTSGRCh37
Build 36X153,909,458 - 153,909,784RGDNCBI36
CeleraX154,415,000 - 154,415,328RGD
Cytogenetic MapXq28UniSTS
HuRefX142,801,236 - 142,801,562UniSTS
Is Marker For: Genes:   F8A1   FUNDC2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GATGACTCTGGGAAGGTGGA
Reverse Primer TGCGAGATATTTGGTCAGTCA
 

Region

Nucleotide Sequences
GenBank Nucleotide AL645722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX470111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486366.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS991004.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL306476.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583383.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH159150.2 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976431.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 65991 UniSTS
  8263 UniSTS
UniSTS ECD18560 UniSTS SSLP Pipeline