PMC55404P4 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: PMC55404P4

Symbol: PMC55404P4
Previously known as:
RGD ID: 1794780
Expected Size: 260 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37352,257,916 - 52,258,175UniSTSGRCh37
Build 36352,232,956 - 52,233,215RGDNCBI36
Celera352,237,228 - 52,237,487RGD
Cytogenetic Map3p21.3UniSTS
HuRef352,320,078 - 52,320,337UniSTS
Is Marker For: Genes:   TLR9  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTGCCCCACTTCTCCATG
Reverse Primer GGCACAGTCATGATGTTGTTG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_017442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB045180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB445673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC006252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC094021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC097637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF245704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF246972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF246973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF259262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF259263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY359085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY421311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ019999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU170539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU170540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU170541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU170542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU170543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ946876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297121.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976316.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 54106 UniSTS
UniSTS PMC55404P4 UniSTS SSLP Pipeline