PMC316937P1 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: PMC316937P1

Symbol: PMC316937P1
Previously known as:
RGD ID: 1794538
Expected Size: 181 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37627,100,530 - 27,100,710UniSTSGRCh37
Build 36627,208,509 - 27,208,689RGDNCBI36
Celera628,706,529 - 28,706,709RGD
Cytogenetic Map6p22.1UniSTS
HuRef626,908,591 - 26,908,771UniSTS
Is Marker For: Genes:   H2AC11   H2BC11  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGATTTGCGAATCCTGATTGGGCA
Reverse Primer AGCACTGTGTAGCTATAAAGCGCC
 

Region

Nucleotide Sequences
GenBank Nucleotide AF531293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL021807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY131987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001614.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL293821.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976331.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X00088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z56489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z58191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 8969 UniSTS
  8970 UniSTS
UniSTS PMC316937P1 UniSTS SSLP Pipeline